Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17p05
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145651-1|AAD38626.1|  532|Drosophila melanogaster BcDNA.GH0877...    29   5.3  
AE014297-2237|AAF55338.1|  552|Drosophila melanogaster CG10345-P...    29   5.3  
AE014297-4615|ABI31220.1|  509|Drosophila melanogaster CG15539-P...    29   7.0  
AF371281-1|AAK54737.1|  656|Drosophila melanogaster voltage-depe...    28   9.3  
AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB...    28   9.3  

>AF145651-1|AAD38626.1|  532|Drosophila melanogaster BcDNA.GH08773
           protein.
          Length = 532

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 133 NEQPKLDEKYHDNKMNAKDHNNEXGNDVTPQLIDDSEVKLKERI 264
           N QP L+   HD     +DH  E  +   P  ID S   + E++
Sbjct: 172 NSQPMLEMSVHDYMWGYEDHLVELASRFVPNWIDFSSFGIMEKL 215


>AE014297-2237|AAF55338.1|  552|Drosophila melanogaster CG10345-PA
           protein.
          Length = 552

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 133 NEQPKLDEKYHDNKMNAKDHNNEXGNDVTPQLIDDSEVKLKERI 264
           N QP L+   HD     +DH  E  +   P  ID S   + E++
Sbjct: 172 NSQPMLEMSVHDYMWGYEDHLVELASRFVPNWIDFSSFGIMEKL 215


>AE014297-4615|ABI31220.1|  509|Drosophila melanogaster CG15539-PB,
           isoform B protein.
          Length = 509

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/53 (26%), Positives = 31/53 (58%)
 Frame = +1

Query: 469 NYGVNINEYEKQLQRYQHTLNIAQTEKKNAIRKQMLTKAFKLKLLEVENQCNI 627
           NY ++I +  K +    + LNI Q +  NA++K++ T  + L++ + + + N+
Sbjct: 29  NYAISIYDMSKLIDYEHYLLNILQ-KFANALQKRVDTLEYYLEMTDYDREKNL 80


>AF371281-1|AAK54737.1|  656|Drosophila melanogaster
           voltage-dependent calcium channelalpha13 subunit
           protein.
          Length = 656

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +1

Query: 376 SPTFSLTSNNQELDDLELSKSIYSTCIDN-KMNYGVNINEYEKQLQRYQHTLNIAQTEKK 552
           S T  L  +N E +   LS +     +D    +YG N+NE +  LQ+Y      A+ ++K
Sbjct: 514 SKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYG-NLNEPDNMLQQYME----ARDKRK 568

Query: 553 NAIRKQMLTKAFKLKLLEVENQCNIELL 636
           N+I    L K  + K L+   Q + + L
Sbjct: 569 NSISHYNLKKRLEEKELQQLQQLHQQQL 596


>AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB
            protein.
          Length = 2893

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +1

Query: 376  SPTFSLTSNNQELDDLELSKSIYSTCIDN-KMNYGVNINEYEKQLQRYQHTLNIAQTEKK 552
            S T  L  +N E +   LS +     +D    +YG N+NE +  LQ+Y      A+ ++K
Sbjct: 1678 SKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYG-NLNEPDNMLQQYME----ARDKRK 1732

Query: 553  NAIRKQMLTKAFKLKLLEVENQCNIELL 636
            N+I    L K  + K L+   Q + + L
Sbjct: 1733 NSISHYNLKKRLEEKELQQLQQLHQQQL 1760


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,005,804
Number of Sequences: 53049
Number of extensions: 340064
Number of successful extensions: 1127
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)