Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17p02
         (334 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   1.7  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   3.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   5.2  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    20   6.8  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    20   6.8  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   9.1  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 249 ISVFNNNIYNASRARQHSTGPPF 181
           ISVF   + +  R R    GPPF
Sbjct: 201 ISVFKAEVGSKLRPRSSFQGPPF 223


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +1

Query: 49  VFYEIFQHFLLSMSIQYK 102
           VFYE+F++  L+M I++K
Sbjct: 48  VFYEVFRYLELAM-IRWK 64


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 75  KVLKYFIKYK 46
           K+L YF++YK
Sbjct: 426 KILSYFLRYK 435


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 323 NQNIYLSSHLNKKIEKKIYVRQKLIFPFLIIIY 225
           N N Y +++ NKK+   I   +++  P  + +Y
Sbjct: 99  NNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVY 131


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 323 NQNIYLSSHLNKKIEKKIYVRQKLIFPFLIIIY 225
           N N Y +++ NKK+   I   +++  P  + +Y
Sbjct: 99  NNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVY 131


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 204 VWPVKHCIYYY 236
           V+P+  C+YY+
Sbjct: 297 VYPLTGCLYYF 307


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,934
Number of Sequences: 438
Number of extensions: 1531
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)