Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17p01
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z22177-9|CAE18052.1| 110|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81575-3|CAB04629.2| 313|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81047-12|CAB60283.1| 322|Caenorhabditis elegans Hypothetical p... 29 2.3
Z47358-10|CAA87438.1| 507|Caenorhabditis elegans Hypothetical p... 29 4.0
Z47356-9|CAA87420.1| 507|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL023856-3|CAA19562.2| 335|Caenorhabditis elegans Hypothetical ... 29 4.0
U56965-8|AAB52663.1| 314|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical ... 28 7.0
AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical ... 28 7.0
Z82086-4|CAB04998.1| 329|Caenorhabditis elegans Hypothetical pr... 27 9.2
U97017-7|AAB52357.1| 130|Caenorhabditis elegans Hypothetical pr... 27 9.2
U97017-6|AAB52362.1| 374|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF000264-8|AAK70649.2| 165|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical
protein T20B3.3 protein.
Length = 332
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +2
Query: 26 RAVLSIGNVLTMVLHVTNMCC-----GIKLRTICFVIAYLHLVSCVLDIAFHLLTVAIV 187
R VL + + +++ +HV + C I ++++ + + +HL SC+LD+ LT V
Sbjct: 19 RLVLHVISFISIPIHVFGVFCVFFKTPISMQSVKWSMMNVHLFSCLLDLGLSFLTTPFV 77
>Z22177-9|CAE18052.1| 110|Caenorhabditis elegans Hypothetical
protein ZK512.11 protein.
Length = 110
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 554 PHFFDIFGNETYWFLKLLDIFIAVVFITIIQK 649
P F ++F ET++ L + +AV+F+ ++ K
Sbjct: 37 PTFNELFDEETFYVFAFLVVLVAVIFVIVMAK 68
>Z81575-3|CAB04629.2| 313|Caenorhabditis elegans Hypothetical
protein R08H2.3 protein.
Length = 313
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 95 KLRTICFVIAYLHLVSCVLDIAFHLLTVAIVTDGFQCDVNYDKFSAIPWAVVEPLLLVLN 274
K+R + +++ LH V +LDI LT + VN+ S P + PL L +N
Sbjct: 44 KMRHVKWILLLLHFVGALLDIFLSCLTTPV--------VNFPMISGYPLGLAVPLGLPIN 95
Query: 275 L 277
+
Sbjct: 96 V 96
>Z81047-12|CAB60283.1| 322|Caenorhabditis elegans Hypothetical
protein C41G6.14 protein.
Length = 322
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 312 LGVSTICMLSTHRLSQSPDAIPVFSTCTWLTSSIFSLI 425
L + +IC L HR+ ++PV ST + + +FS++
Sbjct: 107 LDILSICFLQKHRVIMRLKSLPVISTGMYTSIIVFSIV 144
>Z47358-10|CAA87438.1| 507|Caenorhabditis elegans Hypothetical
protein ZK1307.8 protein.
Length = 507
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -2
Query: 553 LVSEINDLHHDLYYGEAEEHSHRFGISLI*CSQIGH-DNPQP-NQINEKIED 404
L S++ND + D G E + G + CS +GH N P N++N+K+ D
Sbjct: 56 LYSQLNDDYCDCKDGSDEPGTSACGNAFFYCSNVGHKGNFIPTNRVNDKLCD 107
>Z47356-9|CAA87420.1| 507|Caenorhabditis elegans Hypothetical
protein ZK1307.8 protein.
Length = 507
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -2
Query: 553 LVSEINDLHHDLYYGEAEEHSHRFGISLI*CSQIGH-DNPQP-NQINEKIED 404
L S++ND + D G E + G + CS +GH N P N++N+K+ D
Sbjct: 56 LYSQLNDDYCDCKDGSDEPGTSACGNAFFYCSNVGHKGNFIPTNRVNDKLCD 107
>AL023856-3|CAA19562.2| 335|Caenorhabditis elegans Hypothetical
protein Y94A7B.6 protein.
Length = 335
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Frame = +2
Query: 32 VLSIGNVLTMVLHVTNMCCGI-----KLRTICFVIAYLHLVSCVLDIAFHLLTVAIVTDG 196
+L I + ++ +H+ CC + ++++ + + LH S LD L+++++
Sbjct: 15 ILYITSAFSLPIHIFGGCCILCKTPTAMKSVKWALFNLHFWSASLD-----LSISLLAQP 69
Query: 197 FQCDVNYDKFSAIPWAVVEPLLLVLNLG 280
F C + FS W ++ +V +LG
Sbjct: 70 FMCTPAFAGFSLGIWGLIGVPTVVWSLG 97
>U56965-8|AAB52663.1| 314|Caenorhabditis elegans Hypothetical
protein C15H9.3 protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +2
Query: 23 LRAVLSIGNVLTMVLHVTNMCCGIKLR-TICFVIAYLHLVSCVLDI----AFHLLTVAIV 187
L+A++ I + VL V + LR + F++ LH V+C +D+ F + + +
Sbjct: 6 LKALMCIWGIFWNVLIVAAILKDRVLRNSSTFLLLSLHFVACTVDVGSRLVFDVPSEILN 65
Query: 188 TDGFQCDVNYDKF 226
F+ VNYD F
Sbjct: 66 RPLFRLSVNYDDF 78
>AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical
protein F56C11.6b protein.
Length = 431
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -2
Query: 616 EYVKEFQEPVSFITEY---IEEMRLVSEINDLHHDLYYGEAEEH-SHRFGI 476
++ K + V FI +Y RL + + DL HD+Y+ + + H S FG+
Sbjct: 271 DHEKNMHQIVKFIGDYSINYGTYRLANIMTDLQHDVYFYQFDYHNSAGFGV 321
>AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical
protein F56C11.6a protein.
Length = 548
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -2
Query: 616 EYVKEFQEPVSFITEY---IEEMRLVSEINDLHHDLYYGEAEEH-SHRFGI 476
++ K + V FI +Y RL + + DL HD+Y+ + + H S FG+
Sbjct: 388 DHEKNMHQIVKFIGDYSINYGTYRLANIMTDLQHDVYFYQFDYHNSAGFGV 438
>Z82086-4|CAB04998.1| 329|Caenorhabditis elegans Hypothetical
protein ZK228.7 protein.
Length = 329
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 95 KLRTICFVIAYLHLVSCVLDIAFHLLTVAIVT 190
K++++ + ++HLVS LD+ F L ++T
Sbjct: 44 KMQSVKAGLLFIHLVSATLDVFFSFLAAPVLT 75
>U97017-7|AAB52357.1| 130|Caenorhabditis elegans Hypothetical
protein F47B3.2 protein.
Length = 130
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/35 (25%), Positives = 22/35 (62%)
Frame = -2
Query: 238 GYSAELIVINVALEAISDNSNCQQMKRYIQDTRHQ 134
G S ++ I++ ++ + NC+ MK+ +++ R+Q
Sbjct: 26 GRSGTIVGISLIMDKMIQGINCKDMKKLVEEIRNQ 60
>U97017-6|AAB52362.1| 374|Caenorhabditis elegans Hypothetical
protein F47B3.7 protein.
Length = 374
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/35 (25%), Positives = 22/35 (62%)
Frame = -2
Query: 238 GYSAELIVINVALEAISDNSNCQQMKRYIQDTRHQ 134
G S ++ I++ ++ + NC+ MK+ +++ R+Q
Sbjct: 270 GRSGTIVGISLIMDKMIQGINCKDMKKLVEEIRNQ 304
>AF000264-8|AAK70649.2| 165|Caenorhabditis elegans Hypothetical
protein F43E2.11 protein.
Length = 165
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 248 VEPLLLVLNLGTHGFYPFPGTFRRQYNMYVEYTSII 355
V P+ +V L G+ PFP T R+Y + E +I+
Sbjct: 83 VHPITVVRELIQFGYEPFPTTCGRKYIFFGEEMAIL 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,311,785
Number of Sequences: 27780
Number of extensions: 395974
Number of successful extensions: 1138
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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