Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17o16
(624 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209079-1|BAD92316.1| 951|Homo sapiens bromodomain containing ... 140 5e-33
X94234-1|CAA63925.1| 835|Homo sapiens skeletal muscle abundant ... 114 3e-25
BC008076-1|AAH08076.1| 920|Homo sapiens BRD8 protein protein. 114 3e-25
BC008039-1|AAH08039.1| 920|Homo sapiens BRD8 protein protein. 114 3e-25
AF016270-1|AAB87858.1| 920|Homo sapiens thyroid hormone recepto... 114 3e-25
BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil do... 37 0.067
BC037774-1|AAH37774.1| 352|Homo sapiens GCC2 protein protein. 37 0.067
BC020645-1|AAH20645.1| 416|Homo sapiens Unknown (protein for IM... 37 0.067
AF432211-1|AAL99918.1| 460|Homo sapiens CLL-associated antigen ... 37 0.067
AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein. 37 0.067
AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein. 37 0.067
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 35 0.27
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 35 0.27
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein. 35 0.27
AF273042-1|AAG34902.1| 685|Homo sapiens CTCL tumor antigen se1-... 34 0.47
X84373-1|CAA59108.1| 1158|Homo sapiens nuclear factor RIP140 pro... 30 5.8
BC040361-1|AAH40361.1| 1158|Homo sapiens nuclear receptor intera... 30 5.8
AL163207-1|CAB90396.1| 1158|Homo sapiens nuclear factor protein. 30 5.8
AF248484-1|AAF62185.1| 1158|Homo sapiens nuclear factor RIP140 p... 30 5.8
AF127577-1|AAF35255.1| 1158|Homo sapiens nuclear factor RIP140 p... 30 5.8
>AB209079-1|BAD92316.1| 951|Homo sapiens bromodomain containing 8
isoform 1 variant protein.
Length = 951
Score = 140 bits (338), Expect = 5e-33
Identities = 65/128 (50%), Positives = 91/128 (71%)
Frame = +3
Query: 228 PLDTWNIREQLCLASAVVRSGDQNWMSVSRALKTLGEPNRPPDWYSQKSCAAQYGTLLEH 407
P + W+IRE+LCLAS+V+RSGDQNW+SVSRA+K EP RPPDW+SQK CA+QY LLE
Sbjct: 15 PTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLET 74
Query: 408 VETPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRNPST 587
ETPKRK+ VET ++ I+++LT +R+ E++K I E +++ +K + +E+
Sbjct: 75 TETPKRKRGEKGEVVETVEDVIVRKLTAERVEELKKVIKETQERYRRLKRD-AELIQAGH 133
Query: 588 SDERLLEL 611
D RL EL
Sbjct: 134 MDSRLDEL 141
>X94234-1|CAA63925.1| 835|Homo sapiens skeletal muscle abundant
protein 2 protein.
Length = 835
Score = 114 bits (274), Expect = 3e-25
Identities = 54/111 (48%), Positives = 76/111 (68%)
Frame = +3
Query: 279 VRSGDQNWMSVSRALKTLGEPNRPPDWYSQKSCAAQYGTLLEHVETPKRKKRNSDGGVET 458
+RSGDQNW+SVSRA+K EP RPPDW+SQK CA+QY LLE ETPKRK+ VET
Sbjct: 1 MRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKRKRGEKGEVVET 60
Query: 459 PQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRNPSTSDERLLEL 611
++ I+++LT +R+ E++K I E +++ +K + +E+ D RL EL
Sbjct: 61 VEDVIVRKLTAERVEELKKVIKETQERYRRLKRD-AELIQAGHMDSRLDEL 110
>BC008076-1|AAH08076.1| 920|Homo sapiens BRD8 protein protein.
Length = 920
Score = 114 bits (274), Expect = 3e-25
Identities = 54/111 (48%), Positives = 76/111 (68%)
Frame = +3
Query: 279 VRSGDQNWMSVSRALKTLGEPNRPPDWYSQKSCAAQYGTLLEHVETPKRKKRNSDGGVET 458
+RSGDQNW+SVSRA+K EP RPPDW+SQK CA+QY LLE ETPKRK+ VET
Sbjct: 1 MRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKRKRGEKGEVVET 60
Query: 459 PQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRNPSTSDERLLEL 611
++ I+++LT +R+ E++K I E +++ +K + +E+ D RL EL
Sbjct: 61 VEDVIVRKLTAERVEELKKVIKETQERYRRLKRD-AELIQAGHMDSRLDEL 110
>BC008039-1|AAH08039.1| 920|Homo sapiens BRD8 protein protein.
Length = 920
Score = 114 bits (274), Expect = 3e-25
Identities = 54/111 (48%), Positives = 76/111 (68%)
Frame = +3
Query: 279 VRSGDQNWMSVSRALKTLGEPNRPPDWYSQKSCAAQYGTLLEHVETPKRKKRNSDGGVET 458
+RSGDQNW+SVSRA+K EP RPPDW+SQK CA+QY LLE ETPKRK+ VET
Sbjct: 1 MRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKRKRGEKGEVVET 60
Query: 459 PQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRNPSTSDERLLEL 611
++ I+++LT +R+ E++K I E +++ +K + +E+ D RL EL
Sbjct: 61 VEDVIVRKLTAERVEELKKVIKETQERYRRLKRD-AELIQAGHMDSRLDEL 110
>AF016270-1|AAB87858.1| 920|Homo sapiens thyroid hormone receptor
coactivating protein protein.
Length = 920
Score = 114 bits (274), Expect = 3e-25
Identities = 54/111 (48%), Positives = 76/111 (68%)
Frame = +3
Query: 279 VRSGDQNWMSVSRALKTLGEPNRPPDWYSQKSCAAQYGTLLEHVETPKRKKRNSDGGVET 458
+RSGDQNW+SVSRA+K EP RPPDW+SQK CA+QY LLE ETPKRK+ VET
Sbjct: 1 MRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKRKRGEKGEVVET 60
Query: 459 PQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRNPSTSDERLLEL 611
++ I+++LT +R+ E++K I E +++ +K + +E+ D RL EL
Sbjct: 61 VEDVIVRKLTAERVEELKKVIKETQERYRRLKRD-AELIQAGHMDSRLDEL 110
>BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil
domain containing 2 protein.
Length = 1583
Score = 36.7 bits (81), Expect = 0.067
Identities = 26/144 (18%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 156 LETPFPKHNLKMSSIQERL-QLKRVPLDTWNIREQLCLASAVVRSGDQNWMSVSRALKTL 332
+E + ++S+QE L QLK + + ++E +C A + + ++ + L
Sbjct: 122 IEANSQHYQKNINSLQEELLQLKAIHQE--EVKELMCQIEASAKEHEAEINKLNELKENL 179
Query: 333 GEPNRPPDWYSQKSCAAQYGTLLEHVE--TPKRKKRNSDGGVETPQESILKRLTQDRIAE 506
+ S+K+ +Y LE++ T + N + + + ++++ +++
Sbjct: 180 VKQCEA----SEKNIQKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKH 235
Query: 507 IQKNIAEMSQQHEVMKDELSEIRN 578
++ + E+ QH ++KDE++ + N
Sbjct: 236 LEDTLKELESQHSILKDEVTYMNN 259
>BC037774-1|AAH37774.1| 352|Homo sapiens GCC2 protein protein.
Length = 352
Score = 36.7 bits (81), Expect = 0.067
Identities = 26/144 (18%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 156 LETPFPKHNLKMSSIQERL-QLKRVPLDTWNIREQLCLASAVVRSGDQNWMSVSRALKTL 332
+E + ++S+QE L QLK + + ++E +C A + + ++ + L
Sbjct: 122 IEANSQHYQKNINSLQEELLQLKAIHQE--EVKELMCQIEASAKEHEAEINKLNELKENL 179
Query: 333 GEPNRPPDWYSQKSCAAQYGTLLEHVE--TPKRKKRNSDGGVETPQESILKRLTQDRIAE 506
+ S+K+ +Y LE++ T + N + + + ++++ +++
Sbjct: 180 VKQCEA----SEKNIQKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKH 235
Query: 507 IQKNIAEMSQQHEVMKDELSEIRN 578
++ + E+ QH ++KDE++ + N
Sbjct: 236 LEDTLKELESQHSILKDEVTYMNN 259
>BC020645-1|AAH20645.1| 416|Homo sapiens Unknown (protein for
IMAGE:4659829) protein.
Length = 416
Score = 36.7 bits (81), Expect = 0.067
Identities = 26/144 (18%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 156 LETPFPKHNLKMSSIQERL-QLKRVPLDTWNIREQLCLASAVVRSGDQNWMSVSRALKTL 332
+E + ++S+QE L QLK + + ++E +C A + + ++ + L
Sbjct: 197 IEANSQHYQKNINSLQEELLQLKAIHQE--EVKELMCQIEASAKEHEAEINKLNELKENL 254
Query: 333 GEPNRPPDWYSQKSCAAQYGTLLEHVE--TPKRKKRNSDGGVETPQESILKRLTQDRIAE 506
+ S+K+ +Y LE++ T + N + + + ++++ +++
Sbjct: 255 VKQCEA----SEKNIQKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKH 310
Query: 507 IQKNIAEMSQQHEVMKDELSEIRN 578
++ + E+ QH ++KDE++ + N
Sbjct: 311 LEDTLKELESQHSILKDEVTYMNN 334
>AF432211-1|AAL99918.1| 460|Homo sapiens CLL-associated antigen
KW-11 protein.
Length = 460
Score = 36.7 bits (81), Expect = 0.067
Identities = 26/144 (18%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 156 LETPFPKHNLKMSSIQERL-QLKRVPLDTWNIREQLCLASAVVRSGDQNWMSVSRALKTL 332
+E + ++S+QE L QLK + + ++E +C A + + ++ + L
Sbjct: 235 IEANSQHYQKNINSLQEELLQLKAIHQE--EVKELMCQIEASAKEHEAEINKLNELKENL 292
Query: 333 GEPNRPPDWYSQKSCAAQYGTLLEHVE--TPKRKKRNSDGGVETPQESILKRLTQDRIAE 506
+ S+K+ +Y LE++ T + N + + + ++++ +++
Sbjct: 293 VKQCEA----SEKNIQKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKH 348
Query: 507 IQKNIAEMSQQHEVMKDELSEIRN 578
++ + E+ QH ++KDE++ + N
Sbjct: 349 LEDTLKELESQHSILKDEVTYMNN 372
>AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein.
Length = 1583
Score = 36.7 bits (81), Expect = 0.067
Identities = 26/144 (18%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 156 LETPFPKHNLKMSSIQERL-QLKRVPLDTWNIREQLCLASAVVRSGDQNWMSVSRALKTL 332
+E + ++S+QE L QLK + + ++E +C A + + ++ + L
Sbjct: 122 IEANSQHYQKNINSLQEELLQLKAIHQE--EVKELMCQIEASAKEHEAEINKLNELKENL 179
Query: 333 GEPNRPPDWYSQKSCAAQYGTLLEHVE--TPKRKKRNSDGGVETPQESILKRLTQDRIAE 506
+ S+K+ +Y LE++ T + N + + + ++++ +++
Sbjct: 180 VKQCEA----SEKNIQKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKH 235
Query: 507 IQKNIAEMSQQHEVMKDELSEIRN 578
++ + E+ QH ++KDE++ + N
Sbjct: 236 LEDTLKELESQHSILKDEVTYMNN 259
>AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein.
Length = 1635
Score = 36.7 bits (81), Expect = 0.067
Identities = 26/144 (18%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 156 LETPFPKHNLKMSSIQERL-QLKRVPLDTWNIREQLCLASAVVRSGDQNWMSVSRALKTL 332
+E + ++S+QE L QLK + + ++E +C A + + ++ + L
Sbjct: 174 IEANSQHYQKNINSLQEELLQLKAIHQE--EVKELMCQIEASAKEHEAEINKLNELKENL 231
Query: 333 GEPNRPPDWYSQKSCAAQYGTLLEHVE--TPKRKKRNSDGGVETPQESILKRLTQDRIAE 506
+ S+K+ +Y LE++ T + N + + + ++++ +++
Sbjct: 232 VKQCEA----SEKNIQKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKH 287
Query: 507 IQKNIAEMSQQHEVMKDELSEIRN 578
++ + E+ QH ++KDE++ + N
Sbjct: 288 LEDTLKELESQHSILKDEVTYMNN 311
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 34.7 bits (76), Expect = 0.27
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Frame = +3
Query: 180 NLKMSSIQERLQLKRVPLDTWNIREQL--CLASAVVRSGDQNWMSVSRALKTLGEPNRPP 353
NLK + +++ +++ L ++R QL CLA S ++N + + ++ GE
Sbjct: 667 NLKKVAFDVKMENEKLVLACEDVRHQLEECLAGNNQLSLEKNTIVETLKMEK-GEIEAEL 725
Query: 354 DWYSQKSCAAQYGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDR---IAEIQKNIA 524
W ++K + + +E + + ++ E ++K L Q + IAE++KNI
Sbjct: 726 CW-AKKRLLEEANKYEKTIEELSNARNLNTSALQLEHEHLIK-LNQKKDMEIAELKKNIE 783
Query: 525 EMSQQHEVMKDELS 566
+M H+ KD LS
Sbjct: 784 QMDTDHKETKDVLS 797
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 34.7 bits (76), Expect = 0.27
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Frame = +3
Query: 180 NLKMSSIQERLQLKRVPLDTWNIREQL--CLASAVVRSGDQNWMSVSRALKTLGEPNRPP 353
NLK + +++ +++ L ++R QL CLA S ++N + + ++ GE
Sbjct: 382 NLKKVAFDVKMENEKLVLACEDVRHQLEECLAGNNQLSLEKNTIVETLKMEK-GEIEAEL 440
Query: 354 DWYSQKSCAAQYGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDR---IAEIQKNIA 524
W ++K + + +E + + ++ E ++K L Q + IAE++KNI
Sbjct: 441 CW-AKKRLLEEANKYEKTIEELSNARNLNTSALQLEHEHLIK-LNQKKDMEIAELKKNIE 498
Query: 525 EMSQQHEVMKDELS 566
+M H+ KD LS
Sbjct: 499 QMDTDHKETKDVLS 512
>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
Length = 1978
Score = 34.7 bits (76), Expect = 0.27
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Frame = +3
Query: 180 NLKMSSIQERLQLKRVPLDTWNIREQL--CLASAVVRSGDQNWMSVSRALKTLGEPNRPP 353
NLK + +++ +++ L ++R QL CLA S ++N + + ++ GE
Sbjct: 667 NLKKVAFDVKMENEKLVLACEDVRHQLEECLAGNNQLSLEKNTIVETLKMEK-GEIEAEL 725
Query: 354 DWYSQKSCAAQYGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDR---IAEIQKNIA 524
W ++K + + +E + + ++ E ++K L Q + IAE++KNI
Sbjct: 726 CW-AKKRLLEEANKYEKTIEELSNARNLNTSALQLEHEHLIK-LNQKKDMEIAELKKNIE 783
Query: 525 EMSQQHEVMKDELS 566
+M H+ KD LS
Sbjct: 784 QMDTDHKETKDVLS 797
>AF273042-1|AAG34902.1| 685|Homo sapiens CTCL tumor antigen se1-1
protein.
Length = 685
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/74 (18%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 363 SQKSCAAQYGTLLEHVE--TPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQ 536
S+K+ +Y LE++ T + N + + + ++++ +++ ++ + E+
Sbjct: 32 SEKNIQKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKHLEDTLKELES 91
Query: 537 QHEVMKDELSEIRN 578
QH ++KDE++ + N
Sbjct: 92 QHSILKDEVTYMNN 105
>X84373-1|CAA59108.1| 1158|Homo sapiens nuclear factor RIP140
protein.
Length = 1158
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 387 YGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELS 566
YG H++T +K + D +T + K L +DR AE ++ + +VM + LS
Sbjct: 178 YGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGT--KVMSEPLS 235
>BC040361-1|AAH40361.1| 1158|Homo sapiens nuclear receptor
interacting protein 1 protein.
Length = 1158
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 387 YGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELS 566
YG H++T +K + D +T + K L +DR AE ++ + +VM + LS
Sbjct: 178 YGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGT--KVMSEPLS 235
>AL163207-1|CAB90396.1| 1158|Homo sapiens nuclear factor protein.
Length = 1158
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 387 YGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELS 566
YG H++T +K + D +T + K L +DR AE ++ + +VM + LS
Sbjct: 178 YGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGT--KVMSEPLS 235
>AF248484-1|AAF62185.1| 1158|Homo sapiens nuclear factor RIP140
protein.
Length = 1158
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 387 YGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELS 566
YG H++T +K + D +T + K L +DR AE ++ + +VM + LS
Sbjct: 178 YGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGT--KVMSEPLS 235
>AF127577-1|AAF35255.1| 1158|Homo sapiens nuclear factor RIP140
protein.
Length = 1158
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 387 YGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELS 566
YG H++T +K + D +T + K L +DR AE ++ + +VM + LS
Sbjct: 178 YGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGT--KVMSEPLS 235
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,888,330
Number of Sequences: 237096
Number of extensions: 2163044
Number of successful extensions: 8894
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8894
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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