Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17o13
         (347 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79805-1|CAA56200.1|  127|Homo sapiens PC4, p15 protein.               61   8e-10
U12979-1|AAA20980.1|  127|Homo sapiens PC4 protein.                    61   8e-10
CR456902-1|CAG33183.1|  127|Homo sapiens PC4 protein.                  61   8e-10
BC105972-1|AAI05973.1|  127|Homo sapiens SUB1 homolog (S. cerevi...    61   8e-10
BC022339-1|AAH22339.1|  127|Homo sapiens SUB1 homolog (S. cerevi...    61   8e-10
BC018189-1|AAH18189.1|  127|Homo sapiens SUB1 homolog (S. cerevi...    61   8e-10
BC010537-1|AAH10537.1|  127|Homo sapiens SUB1 homolog (S. cerevi...    61   8e-10
BC009610-1|AAH09610.1|  127|Homo sapiens SUB1 homolog (S. cerevi...    61   8e-10
AB209285-1|BAD92522.1|  134|Homo sapiens activated RNA polymeras...    61   8e-10
AY584192-1|AAT72821.1|   73|Homo sapiens activated RNA polymeras...    58   1e-08
AF137378-1|AAD51919.2| 1188|Homo sapiens integrin alpha 11 subun...    28   9.3  
AF109681-1|AAF01258.1| 1189|Homo sapiens integrin alpha-11 subun...    28   9.3  

>X79805-1|CAA56200.1|  127|Homo sapiens PC4, p15 protein.
          Length = 127

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGKV +DIRE++ +  GE+ PG+KGISL PEQW +L     ++++ V  +
Sbjct: 70  RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127


>U12979-1|AAA20980.1|  127|Homo sapiens PC4 protein.
          Length = 127

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGKV +DIRE++ +  GE+ PG+KGISL PEQW +L     ++++ V  +
Sbjct: 70  RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127


>CR456902-1|CAG33183.1|  127|Homo sapiens PC4 protein.
          Length = 127

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGKV +DIRE++ +  GE+ PG+KGISL PEQW +L     ++++ V  +
Sbjct: 70  RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127


>BC105972-1|AAI05973.1|  127|Homo sapiens SUB1 homolog (S.
           cerevisiae) protein.
          Length = 127

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGKV +DIRE++ +  GE+ PG+KGISL PEQW +L     ++++ V  +
Sbjct: 70  RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127


>BC022339-1|AAH22339.1|  127|Homo sapiens SUB1 homolog (S.
           cerevisiae) protein.
          Length = 127

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGKV +DIRE++ +  GE+ PG+KGISL PEQW +L     ++++ V  +
Sbjct: 70  RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127


>BC018189-1|AAH18189.1|  127|Homo sapiens SUB1 homolog (S.
           cerevisiae) protein.
          Length = 127

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGKV +DIRE++ +  GE+ PG+KGISL PEQW +L     ++++ V  +
Sbjct: 70  RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127


>BC010537-1|AAH10537.1|  127|Homo sapiens SUB1 homolog (S.
           cerevisiae) protein.
          Length = 127

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGKV +DIRE++ +  GE+ PG+KGISL PEQW +L     ++++ V  +
Sbjct: 70  RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127


>BC009610-1|AAH09610.1|  127|Homo sapiens SUB1 homolog (S.
           cerevisiae) protein.
          Length = 127

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGKV +DIRE++ +  GE+ PG+KGISL PEQW +L     ++++ V  +
Sbjct: 70  RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127


>AB209285-1|BAD92522.1|  134|Homo sapiens activated RNA polymerase
           II transcription cofactor 4 variant protein.
          Length = 134

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGKV +DIRE++ +  GE+ PG+KGISL PEQW +L     ++++ V  +
Sbjct: 77  RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 134


>AY584192-1|AAT72821.1|   73|Homo sapiens activated RNA polymerase
           II transcription cofactor 4 protein.
          Length = 73

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = +3

Query: 126 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 296
           + + VR+FKGK+ +DIRE++ +  GE+ PG+KGISL  EQW +L     ++++ V  +
Sbjct: 16  RYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAVRKL 73


>AF137378-1|AAD51919.2| 1188|Homo sapiens integrin alpha 11 subunit
           precursor protein.
          Length = 1188

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 298 HMELTVSLTSSPTDNNFLHCS 236
           +M L +SL ++P DN+FL CS
Sbjct: 102 NMRLGLSLATNPKDNSFLACS 122


>AF109681-1|AAF01258.1| 1189|Homo sapiens integrin alpha-11 subunit
           precursor protein.
          Length = 1189

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 298 HMELTVSLTSSPTDNNFLHCS 236
           +M L +SL ++P DN+FL CS
Sbjct: 102 NMRLGLSLATNPKDNSFLACS 122


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,147,573
Number of Sequences: 237096
Number of extensions: 921743
Number of successful extensions: 5784
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5774
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)