Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17o08
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 36 0.016
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 36 0.028
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 36 0.028
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 34 0.065
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 33 0.15
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 30 1.1
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 30 1.1
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 29 1.8
U55365-11|AAA98576.2| 357|Caenorhabditis elegans Hypothetical p... 29 2.4
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 29 3.2
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 4.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 4.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 4.2
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 28 5.6
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 5.6
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 5.6
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 5.6
BX677430-1|CAI79176.1| 340|Caenorhabditis elegans Hypothetical ... 27 7.4
Z70268-2|CAA94218.1| 98|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical ... 27 9.8
AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
protein AC3.5 protein.
Length = 1090
Score = 36.3 bits (80), Expect = 0.016
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = +1
Query: 247 EYLLPGDVVPTFYDVLLIYDVDPATNFSYFGRVDIKLNILKPTSKIVLHAQGFSIPEEEV 426
E LP +V P +YDV L V G +KLNI +PT+KIVL+A+
Sbjct: 153 ELALPKNVQPVWYDVSLSPKVG---GNGTMGLAHVKLNIEEPTNKIVLNAKDIEFTRNLE 209
Query: 427 TLTGPKEV 450
+ KEV
Sbjct: 210 KIQLSKEV 217
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 35.5 bits (78), Expect = 0.028
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +1
Query: 256 LPGDVVPTFYDVLLIYDVDPATN-FSYFGRVDIKLNILKPTSKIVLHAQGFSIPEEEVTL 432
LP PT Y+V L P N FS+ G I + I + T + +HAQ I + +
Sbjct: 16 LPTFAEPTHYNVRL----SPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLLIQSVSL-I 70
Query: 433 TGPKEVAVD-NVKLNDTFNLLTLSLSQQLDEGDNYVLRIPFYGNLQQDLDG 582
T P + + +D N+LT+ L + + L F G L + G
Sbjct: 71 TQPGDASKSLETSYDDKLNILTIKLPTTM-QPQKVQLDFKFVGELNDKMRG 120
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 35.5 bits (78), Expect = 0.028
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +1
Query: 256 LPGDVVPTFYDVLLIYDVDPATN-FSYFGRVDIKLNILKPTSKIVLHAQGFSIPEEEVTL 432
LP PT Y+V L P N FS+ G I + I + T + +HAQ I + +
Sbjct: 80 LPTFAEPTHYNVRL----SPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLLIQSVSL-I 134
Query: 433 TGPKEVAVD-NVKLNDTFNLLTLSLSQQLDEGDNYVLRIPFYGNLQQDLDG 582
T P + + +D N+LT+ L + + L F G L + G
Sbjct: 135 TQPGDASKSLETSYDDKLNILTIKLPTTM-QPQKVQLDFKFVGELNDKMRG 184
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 34.3 bits (75), Expect = 0.065
Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Frame = +2
Query: 68 INCKILLIVGSLNFKLFILRCVPNLGSRNNWTSC-LYAVDIVQWRACILFYCCPVR---C 235
+N ++ + L F L PNL T C YAV + CCP C
Sbjct: 1 MNYFLIFSIFVLQFHLSKCELEPNLCDEKRTTQCDEYAVCCPIGNE--QYGCCPFTGGTC 58
Query: 236 CPRANTCC-PAMWCRHSTTCSSFTT 307
CP N CC P C TC TT
Sbjct: 59 CPGTNHCCPPGFSCTTIGTCKRTTT 83
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 218 CCP-VRCCPRANTCC-PAMWCRHSTTCSS 298
CCP + CCP+ CC PA C TC S
Sbjct: 659 CCPPIPCCPQPKICCQPAPVCLPPPTCCS 687
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 218 CCP-VRCCPRANTCC-PAMWCRHSTTCSS 298
CCP + CCP+ CC PA C TC S
Sbjct: 304 CCPPIPCCPQPKICCQPAPVCLPPPTCCS 332
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 218 CCP-VRCCPRANTCC-PAMWCRHSTTCSS 298
CCP + CCP+ CC PA C TC S
Sbjct: 256 CCPPIPCCPQPKICCQPAPVCLPPPTCCS 284
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 218 CCP-VRCCPRANTCC-PAMWCRHSTTCSS 298
CCP + CCP+ CC PA C TC S
Sbjct: 984 CCPPIPCCPQPKICCQPAPVCLPPPTCCS 1012
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 31.1 bits (67), Expect = 0.60
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 269 WCRHSTTCSSFTTWIRRRTSATSAVSTLN*TSSNRPQRSCSTRKASA 409
+C CSS TT++ T +S S ++ TSS+ S ST A++
Sbjct: 155 YCSIIANCSSTTTFLSTTTPVSSTTSNISLTSSSTQSYSSSTAGATS 201
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 343 VDIKLNILKPTSKIVLHAQGFSIPEEEVTLTGPKE-VAVDNVKLNDTFNL---LTLSLSQ 510
+DIK N L TSKI+ + Q + E +V G ++ DN+ T ++ +S
Sbjct: 907 LDIKSNKLPETSKIIYYVQRCDLTENQVLCAGEEDHCFFDNIPGETTISVQVRAAVSFHD 966
Query: 511 QLDEGDNYVL 540
L GD VL
Sbjct: 967 ALTHGDWSVL 976
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical protein
C34F6.10 protein.
Length = 1441
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 343 VDIKLNILKPTSKIVLHAQGFSIPEEEVTLTGPKE-VAVDNVKLNDTFNL---LTLSLSQ 510
+DIK N L TSKI+ + Q + E +V G ++ DN+ T ++ +S
Sbjct: 907 LDIKSNKLPETSKIIYYVQRCDLTENQVLCAGEEDHCFFDNIPGETTISVQVRAAVSFHD 966
Query: 511 QLDEGDNYVL 540
L GD VL
Sbjct: 967 ALTHGDWSVL 976
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -2
Query: 218 NKIKCKHAIVQYLLHTNTKSSYFDSQDSEHISK*IT*SSMNRRLKVFCN 72
N+I CKH +++ L S + DSE ++ S + + +++FCN
Sbjct: 328 NQIGCKHVVLKCHLRLAELYSQLNDDDSEETARRAA-SRLTQEMQLFCN 375
>U55365-11|AAA98576.2| 357|Caenorhabditis elegans Hypothetical
protein C12D5.10 protein.
Length = 357
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -1
Query: 183 STAYKHEVQLFRL-----PRFGTHLKMNNLKFNEPTIKSILQFIHL 61
S+ Y+H V L + P G + ++N L+ NEP + LQF+ L
Sbjct: 166 SSQYEHFVDLISIKPDGEPCVGLYYELNELRCNEPVSQFSLQFVTL 211
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 298 IYDVDPATNFSYFGRVDIKLNILKPTSK 381
IYD DP F + GRV I L ++ K
Sbjct: 511 IYDEDPNNRFEFLGRVQIPLKSIRNCQK 538
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 298 IYDVDPATNFSYFGRVDIKLNILKPTSK 381
IYD DP F + GRV I L ++ K
Sbjct: 597 IYDEDPNNRFEFLGRVQIPLKSIRNCQK 624
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 203 CILFYCCPVRCCPRANTCCPAMWCRHSTTCSSFTTWIRRRTSATS 337
C+L YC V CP NT C M + C + IR+ T+
Sbjct: 2687 CVLDYCSDVNFCP-TNTTCKNMEQQAECKCDAGFMDIRKSEKRTA 2730
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 203 CILFYCCPVRCCPRANTCCPAMWCRHSTTCSSFTTWIRRRTSATS 337
C+L YC V CP NT C M + C + IR+ T+
Sbjct: 3271 CVLDYCSDVNFCP-TNTTCKNMEQQAECKCDAGFMDIRKSEKRTA 3314
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 203 CILFYCCPVRCCPRANTCCPAMWCRHSTTCSSFTTWIRRRTSATS 337
C+L YC V CP NT C M + C + IR+ T+
Sbjct: 2687 CVLDYCSDVNFCP-TNTTCKNMEQQAECKCDAGFMDIRKSEKRTA 2730
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 203 CILFYCCPVRCCPRANTCCPAMWCRHSTTCSSFTTWIRRRTSATS 337
C+L YC V CP NT C M + C + IR+ T+
Sbjct: 3271 CVLDYCSDVNFCP-TNTTCKNMEQQAECKCDAGFMDIRKSEKRTA 3314
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 203 CILFYCCPVRCCPRANTCCPAMWCRHSTTCSSFTTWIRRRTSATS 337
C+L YC V CP NT C M + C + IR+ T+
Sbjct: 3271 CVLDYCSDVNFCP-TNTTCKNMEQQAECKCDAGFMDIRKSEKRTA 3314
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC RCC TCC C C
Sbjct: 95 CCCRRCCTCCRTCCCTRCCTCCRPC 119
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC CC R TCC C C
Sbjct: 103 CCRTCCCTRCCTCCRPCCCGCGCGC 127
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTCSSFTTWIRRRTS 328
CC RCC CC C C R+R S
Sbjct: 107 CCCTRCCTCCRPCCCGCGCGCGCGCCGCGGGGRKRRS 143
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC CC R TCC C C
Sbjct: 85 CCRTCCCTRCCTCCRPCCCGCGCGC 109
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTCSSFTTWIRRRTS 328
CC RCC CC C C R+R S
Sbjct: 89 CCCTRCCTCCRPCCCGCGCGCGCGCCGCGGGGRKRRS 125
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC RCC TCC C C
Sbjct: 93 CCCRRCCTCCRTCCCTRCCTCCRPC 117
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC CC R TCC C C
Sbjct: 101 CCRTCCCTRCCTCCRPCCCGCGCGC 125
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC CC R TCC C C
Sbjct: 87 CCRTCCCTRCCTCCRPCCCGCGCGC 111
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC CC R TCC C C
Sbjct: 90 CCRTCCCTRCCTCCRPCCCGCGCGC 114
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC RCC TCC C C
Sbjct: 94 CCCRRCCTCCRTCCCTRCCTCCRPC 118
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC CC R TCC C C
Sbjct: 102 CCRTCCCTRCCTCCRPCCCGCGCGC 126
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC RCC TCC C C
Sbjct: 94 CCCRRCCTCCRTCCCTRCCTCCRPC 118
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC CC R TCC C C
Sbjct: 102 CCRTCCCTRCCTCCRPCCCGCGCGC 126
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC RCC TCC C C
Sbjct: 95 CCCRRCCTCCRTCCCTRCCTCCRPC 119
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 218 CCPVRCCPRANTCCPAMWCRHSTTC 292
CC CC R TCC C C
Sbjct: 103 CCRTCCCTRCCTCCRPCCCGCGCGC 127
>BX677430-1|CAI79176.1| 340|Caenorhabditis elegans Hypothetical
protein VB0395L.1 protein.
Length = 340
Score = 27.5 bits (58), Expect = 7.4
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Frame = +1
Query: 256 LPGDVVPTFYDVLLIYDVDP-ATNFSYFGRVDIKLNILKPTSKIVLHAQ------GFSIP 414
+P VP+ Y+V L ++ P A Y G + + T ++ H S+
Sbjct: 54 IPYITVPSEYNVFLQFNSTPEAVVREYTGSLQMDFVARDITQQLFFHRSDKVKINSISLE 113
Query: 415 EEEVTLTGPKEVAVDNVKLNDTFNLLTLSLSQQLDEGDNYVLRIPFYGNLQQD 573
+ T+T P A D + L SQ+ +YVLRI F G L +
Sbjct: 114 DANGTMTAPTAGAYDKSTGVQAYIPLANLTSQE-----SYVLRIDFQGELDSE 161
>Z70268-2|CAA94218.1| 98|Caenorhabditis elegans Hypothetical
protein T21E8.5 protein.
Length = 98
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -1
Query: 336 EVAEVRRRIHVVNEEHVVECRH 271
EV ++RR+IH++N E ++ R+
Sbjct: 9 EVMDLRRKIHIINAEQFLKTRN 30
>AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical
protein C35A11.3 protein.
Length = 332
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 281 STTCSSFTTWIRRRTSATSAVSTLN*TSSNRPQRSCST 394
STT ++ +T + T+ATS+ T SSN P +T
Sbjct: 38 STTTATESTTVSTSTTATSSTPTTEIFSSNSPSTETTT 75
>AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical
protein C30F12.4 protein.
Length = 246
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Frame = +2
Query: 203 CILFYCCPVRCC-PRANTCC 259
C+ CCP+ CC P CC
Sbjct: 197 CLAVCCCPLTCCLPLICICC 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,052,098
Number of Sequences: 27780
Number of extensions: 313841
Number of successful extensions: 1014
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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