Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17o06
         (307 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   0.64 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   2.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   2.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   3.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.4  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   4.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   4.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    20   6.0  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    20   6.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    20   6.0  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    20   6.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   7.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   7.9  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    20   7.9  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    20   7.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   7.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   7.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   7.9  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 0.64
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 142 TPIRFAIGATDG-RQNTQTWAAVVSQRFSQEKKQQETQYYSH 20
           TP ++    + G  Q  +TW  V     S     Q+ +YYSH
Sbjct: 424 TPYQWDNSTSAGFSQTNKTWLPVNENYKSLNLAAQKREYYSH 465


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 7   EFNNYESNTVFPVVFFLG*NVG*RQLPMFGC 99
           E +N E      +V++LG     R+L + GC
Sbjct: 285 ELHNIEGTHYVKIVYYLGIPSEARELQLPGC 315


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 7   EFNNYESNTVFPVVFFLG*NVG*RQLPMFGC 99
           E +N E      +V++LG     R+L + GC
Sbjct: 300 ELHNIEGTHYVKIVYYLGIPSEARELQLPGC 330


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 152 RSLHSNTFCHRSHRRAPKHPN 90
           RS+H+N   H   R   KH N
Sbjct: 584 RSIHNNYPVHTFGRLTSKHDN 604


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 107 PVCGSDGKTY 136
           PVC S+GK Y
Sbjct: 116 PVCASNGKIY 125


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -2

Query: 120 EPQTGAKTPKHGQLSSANVSAKKKNNRKHSITLI 19
           +P   + TP    L   ++SAK KN++ ++I+L+
Sbjct: 500 QPHQDSATPADQPL---DLSAKPKNSQDNNISLL 530


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 36  VSCCFFSWLKRWLT 77
           V+C   SW  +WL+
Sbjct: 62  VTCDVLSWQSKWLS 75


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -2

Query: 129 LPSEPQTGAKTPKHGQLSSANVSAKKKN 46
           LPS P T  K  K G  S       KK+
Sbjct: 675 LPSLPSTLTKNSKQGLFSKLFAKKVKKD 702


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 204 WMWYSRNDSNSTQVSVSINFCNNFAIKN 287
           ++W  +ND  + + S S+   N + IKN
Sbjct: 216 YVW--KNDEGTLRKSPSLTSLNAYLIKN 241


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 204 WMWYSRNDSNSTQVSVSINFCNNFAIKN 287
           ++W  +ND  + + S S+   N + IKN
Sbjct: 216 YVW--KNDEGTLRKSPSLTSLNAYLIKN 241


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 204 WMWYSRNDSNSTQVSVSINFCNNFAIKN 287
           ++W  +ND  + + S S+   N + IKN
Sbjct: 267 YVW--KNDEGTLRKSPSLTSLNAYLIKN 292


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 204 WMWYSRNDSNSTQVSVSINFCNNFAIKN 287
           ++W  +ND  + + S S+   N + IKN
Sbjct: 216 YVW--KNDEGTLRKSPSLTSLNAYLIKN 241


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 60  LKRWLTTAAHVWV 98
           LKR L T A VW+
Sbjct: 150 LKRVLATIAGVWI 162


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 60  LKRWLTTAAHVWV 98
           LKR L T A VW+
Sbjct: 150 LKRVLATIAGVWI 162


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 228 SNSTQVSVSINFCNNFAIKNN 290
           SN+  +S + N+ NN+   NN
Sbjct: 83  SNNNSLSNNYNYNNNYNNYNN 103


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 237 TQVSVSINFCNNFAIKNNRK 296
           + +S S N+ NN+   NN K
Sbjct: 305 SSLSNSCNYSNNYYNNNNYK 324


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -3

Query: 161 HISRSLHSNTFCHRSHRRAPKH 96
           H    +H+    H SH   P H
Sbjct: 421 HGHSHIHATPHHHHSHAATPHH 442


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 60  LKRWLTTAAHVWV 98
           LKR L T A VW+
Sbjct: 150 LKRVLATIAGVWI 162


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +3

Query: 201 DWMWYSRNDSNS 236
           DW +Y+ N+S++
Sbjct: 123 DWKYYTTNESHA 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,244
Number of Sequences: 438
Number of extensions: 1580
Number of successful extensions: 31
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)