Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17n24
         (570 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5 prot...   109   5e-24
AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein...   109   5e-24
X77584-1|CAA54687.1|  105|Homo sapiens ATL-derived factor/thiore...    29   8.7  
X54539-1|CAA38410.1|  105|Homo sapiens thioredoxin protein.            29   8.7  
CR407665-1|CAG28593.1|  105|Homo sapiens TXN protein.                  29   8.7  
BC054866-1|AAH54866.1|  105|Homo sapiens thioredoxin protein.          29   8.7  
BC039737-1|AAH39737.1|  350|Homo sapiens family with sequence si...    29   8.7  
BC003377-1|AAH03377.1|  105|Homo sapiens thioredoxin protein.          29   8.7  
AY004872-1|AAF87085.1|  105|Homo sapiens thioredoxin protein.          29   8.7  
AL513331-1|CAH70659.1|  350|Homo sapiens family with sequence si...    29   8.7  
AL158158-1|CAI14066.1|  105|Homo sapiens thioredoxin protein.          29   8.7  
AF548001-1|AAN33187.1|  105|Homo sapiens thioredoxin protein.          29   8.7  
AF313911-1|AAG34699.1|  105|Homo sapiens thioredoxin protein.          29   8.7  

>BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5
           protein.
          Length = 123

 Score =  109 bits (263), Expect = 5e-24
 Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = +3

Query: 213 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 389
           V + GFEEF    RA++   G  +F YF+GSK   G SWCPDCV+AEPVVR  L  + + 
Sbjct: 7   VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63

Query: 390 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLF 566
            +F+Y  VG++ YWKD    FR     K+  +PTL+K+   Q+L  S+C    L++MLF
Sbjct: 64  CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLF 120


>AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein
           protein.
          Length = 123

 Score =  109 bits (263), Expect = 5e-24
 Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = +3

Query: 213 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 389
           V + GFEEF    RA++   G  +F YF+GSK   G SWCPDCV+AEPVVR  L  + + 
Sbjct: 7   VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63

Query: 390 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLF 566
            +F+Y  VG++ YWKD    FR     K+  +PTL+K+   Q+L  S+C    L++MLF
Sbjct: 64  CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLF 120


>X77584-1|CAA54687.1|  105|Homo sapiens ATL-derived
           factor/thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 419
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>X54539-1|CAA38410.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 419
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>CR407665-1|CAG28593.1|  105|Homo sapiens TXN protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 419
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>BC054866-1|AAH54866.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 419
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>BC039737-1|AAH39737.1|  350|Homo sapiens family with sequence
           similarity 80, member A protein.
          Length = 350

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +2

Query: 398 CLCRCWR*RILEGQRVPVQNGQSL*VDGHTDFNKMEGSTEA*GKPVQQSGT 550
           C+ + W  + L G  VP+ +  S    GH DF+KM    E  G PV    T
Sbjct: 67  CINKFWTFQELAGHGVPMPDTFSY--GGHEDFSKMIDEAEPLGYPVVVKST 115


>BC003377-1|AAH03377.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 419
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>AY004872-1|AAF87085.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 419
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>AL513331-1|CAH70659.1|  350|Homo sapiens family with sequence
           similarity 80, member A protein.
          Length = 350

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +2

Query: 398 CLCRCWR*RILEGQRVPVQNGQSL*VDGHTDFNKMEGSTEA*GKPVQQSGT 550
           C+ + W  + L G  VP+ +  S    GH DF+KM    E  G PV    T
Sbjct: 67  CINKFWTFQELAGHGVPMPDTFSY--GGHEDFSKMIDEAEPLGYPVVVKST 115


>AL158158-1|CAI14066.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 419
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>AF548001-1|AAN33187.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 419
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>AF313911-1|AAG34699.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 321 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 419
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,173,315
Number of Sequences: 237096
Number of extensions: 1622285
Number of successful extensions: 2938
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2936
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)