Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17n23
         (646 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000113-1|AAH00113.1|  574|Homo sapiens ZNF554 protein protein.       32   2.0  
BC047777-1|AAH47777.1|  538|Homo sapiens ZNF554 protein protein.       31   3.5  
Z26827-1|CAA81424.1|  126|Homo sapiens immunoglobulin variable r...    30   6.1  
AY640519-1|AAT65122.1|  120|Homo sapiens immunoglobulin E variab...    30   8.1  

>BC000113-1|AAH00113.1|  574|Homo sapiens ZNF554 protein protein.
          Length = 574

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 455 AALNTCLIRGRNCYHPSTKLNSCMNTSWVWLSRYAFLYLPRWS 327
           A + TC   GR    P+ + ++C  T +    R A  YLPRWS
Sbjct: 35  APMVTCAHLGRRARLPAAQPSACPGTCFSQEERMAAGYLPRWS 77


>BC047777-1|AAH47777.1|  538|Homo sapiens ZNF554 protein protein.
          Length = 538

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 443 TCLIRGRNCYHPSTKLNSCMNTSWVWLSRYAFLYLPRWS 327
           TC   GR    P+ + ++C  T +    R A  YLPRWS
Sbjct: 3   TCAHLGRRARLPAAQPSACPGTCFSQEERMAAGYLPRWS 41


>Z26827-1|CAA81424.1|  126|Homo sapiens immunoglobulin variable
           region protein.
          Length = 126

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -1

Query: 316 EMTRYG-SLKLILRSSGWRIPIYWNGTIMEQP 224
           EM R G SLK+  RSSG+    YW G + ++P
Sbjct: 11  EMRRPGQSLKISCRSSGFDFSTYWIGWVRQRP 42


>AY640519-1|AAT65122.1|  120|Homo sapiens immunoglobulin E variable
           region protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 298 SLKLILRSSGWRIPIYWNGTIMEQP 224
           SLK+  ++SG+R P +W G + + P
Sbjct: 17  SLKISCKASGYRFPTFWIGWVRQMP 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,716,668
Number of Sequences: 237096
Number of extensions: 2036841
Number of successful extensions: 4442
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4440
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)