Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17n21
         (367 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014609-1|AAH14609.1|  214|Homo sapiens chromosome 19 open read...    29   3.5  
AY753639-1|AAX09280.1|  214|Homo sapiens c113 sperm protein prot...    29   3.5  
AY344117-1|AAQ22368.1|  274|Homo sapiens truncated ATP-binding c...    28   8.0  
AY063515-1|AAL47202.1|  140|Homo sapiens ATP-binding cassette pr...    28   8.0  
AY063514-1|AAL47201.1|  274|Homo sapiens ATP-binding cassette pr...    28   8.0  
AP001660-2|BAA95546.1|  297|Homo sapiens PRED6 protein.                28   8.0  
AF518321-1|AAM70495.1|  169|Homo sapiens ATP-binding cassette pr...    28   8.0  
AF518320-1|AAM70494.1|  245|Homo sapiens ATP-binding cassette pr...    28   8.0  
AF418600-1|AAL99903.1|  325|Homo sapiens ATP-binding cassette pr...    28   8.0  

>BC014609-1|AAH14609.1|  214|Homo sapiens chromosome 19 open reading
           frame 36 protein.
          Length = 214

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/64 (21%), Positives = 30/64 (46%)
 Frame = -3

Query: 326 HVTISNYIGKAASSMKSKIDSF*SFLNSWSERGR*EDCLSHILHCLSCEIIRLVGIYEAI 147
           HV    Y  ++++  KS +    +++N+W ++      +S  L CL    +  + + +A 
Sbjct: 149 HVACFGYNCESSAQWKSAVQGLLNYINNWHKQDTSMSLVSPALRCLEPPHLANLTLEDAA 208

Query: 146 SCYK 135
            C K
Sbjct: 209 ECLK 212


>AY753639-1|AAX09280.1|  214|Homo sapiens c113 sperm protein
           protein.
          Length = 214

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/64 (21%), Positives = 30/64 (46%)
 Frame = -3

Query: 326 HVTISNYIGKAASSMKSKIDSF*SFLNSWSERGR*EDCLSHILHCLSCEIIRLVGIYEAI 147
           HV    Y  ++++  KS +    +++N+W ++      +S  L CL    +  + + +A 
Sbjct: 149 HVACFGYNCESSAQWKSAVQGLLNYINNWHKQDTSMSLVSPALRCLEPPHLANLTLEDAA 208

Query: 146 SCYK 135
            C K
Sbjct: 209 ECLK 212


>AY344117-1|AAQ22368.1|  274|Homo sapiens truncated ATP-binding
           cassette transporter sub-family C member 13 protein.
          Length = 274

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 ISCYKSVHFSKPSILINLF 93
           +SCYK  H  KPS+L  L+
Sbjct: 93  VSCYKEAHIKKPSLLYALW 111


>AY063515-1|AAL47202.1|  140|Homo sapiens ATP-binding cassette
           protein C13 transcript variant B protein.
          Length = 140

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 ISCYKSVHFSKPSILINLF 93
           +SCYK  H  KPS+L  L+
Sbjct: 93  VSCYKEAHIKKPSLLYALW 111


>AY063514-1|AAL47201.1|  274|Homo sapiens ATP-binding cassette
           protein C13 transcript variant A protein.
          Length = 274

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 ISCYKSVHFSKPSILINLF 93
           +SCYK  H  KPS+L  L+
Sbjct: 93  VSCYKEAHIKKPSLLYALW 111


>AP001660-2|BAA95546.1|  297|Homo sapiens PRED6 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 ISCYKSVHFSKPSILINLF 93
           +SCYK  H  KPS+L  L+
Sbjct: 116 VSCYKEAHIKKPSLLYALW 134


>AF518321-1|AAM70495.1|  169|Homo sapiens ATP-binding cassette
           protein C13 protein.
          Length = 169

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 ISCYKSVHFSKPSILINLF 93
           +SCYK  H  KPS+L  L+
Sbjct: 93  VSCYKEAHIKKPSLLYALW 111


>AF518320-1|AAM70494.1|  245|Homo sapiens ATP-binding cassette
           protein C13 protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 ISCYKSVHFSKPSILINLF 93
           +SCYK  H  KPS+L  L+
Sbjct: 64  VSCYKEAHIKKPSLLYALW 82


>AF418600-1|AAL99903.1|  325|Homo sapiens ATP-binding cassette
           protein C13 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 ISCYKSVHFSKPSILINLF 93
           +SCYK  H  KPS+L  L+
Sbjct: 93  VSCYKEAHIKKPSLLYALW 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,069,575
Number of Sequences: 237096
Number of extensions: 803176
Number of successful extensions: 1249
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)