Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17n20
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010150-1|AAH10150.1| 187|Homo sapiens mitochondrial ribosomal... 129 7e-30
AK223069-1|BAD96789.1| 187|Homo sapiens mitochondrial ribosomal... 129 7e-30
EF152584-1|ABO34073.1| 278|Homo sapiens PC1/MRPS28 fusion prote... 89 9e-18
Z26652-1|CAA81393.1| 993|Homo sapiens FLT3 receptor tyrosine ki... 31 3.3
U02687-1|AAA18947.1| 993|Homo sapiens serine/threonine protein ... 31 3.3
BC126350-1|AAI26351.1| 993|Homo sapiens fms-related tyrosine ki... 31 3.3
BC036028-1|AAH36028.1| 596|Homo sapiens FLT3 protein protein. 31 3.3
AL591024-3|CAH70634.1| 996|Homo sapiens fms-related tyrosine ki... 31 3.3
AL445262-1|CAI17231.1| 996|Homo sapiens fms-related tyrosine ki... 31 3.3
AL356915-1|CAI12447.1| 996|Homo sapiens fms-related tyrosine ki... 31 3.3
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 31 4.4
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 31 4.4
AF011368-1|AAB84386.1| 761|Homo sapiens CEV14 protein. 31 4.4
>BC010150-1|AAH10150.1| 187|Homo sapiens mitochondrial ribosomal
protein S28 protein.
Length = 187
Score = 129 bits (312), Expect = 7e-30
Identities = 65/131 (49%), Positives = 92/131 (70%), Gaps = 6/131 (4%)
Frame = +3
Query: 252 SYSDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEE------EKSYTFASLLRNSKLMD 413
S S+SG+ K+ + + GFA A E+ S++L+ E + +FAS+LR+S L
Sbjct: 33 SGSESGSSNAKE-PKTRAGGFASALERHSELLQKVEPLQKGSPKNVESFASMLRHSPLTQ 91
Query: 414 LGDPVGKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGEEYVRGTRVRIQINDLELSS 593
+G K VIG+IFH+VE+DLYIDFG KFHCVC RP + GE+Y +GTRVR+++ DLEL+S
Sbjct: 92 MGPAKDKLVIGRIFHIVENDLYIDFGGKFHCVCRRPEVDGEKYQKGTRVRLRLLDLELTS 151
Query: 594 RFLGSSTDLTL 626
RFLG++TD T+
Sbjct: 152 RFLGATTDTTV 162
>AK223069-1|BAD96789.1| 187|Homo sapiens mitochondrial ribosomal
protein S28 variant protein.
Length = 187
Score = 129 bits (312), Expect = 7e-30
Identities = 65/131 (49%), Positives = 92/131 (70%), Gaps = 6/131 (4%)
Frame = +3
Query: 252 SYSDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEE------EKSYTFASLLRNSKLMD 413
S S+SG+ K+ + + GFA A E+ S++L+ E + +FAS+LR+S L
Sbjct: 33 SGSESGSSNAKE-PKTRAGGFASALERHSELLQKVEPLQKGSPKNVESFASMLRHSPLTQ 91
Query: 414 LGDPVGKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGEEYVRGTRVRIQINDLELSS 593
+G K VIG+IFH+VE+DLYIDFG KFHCVC RP + GE+Y +GTRVR+++ DLEL+S
Sbjct: 92 MGPAKDKLVIGRIFHIVENDLYIDFGGKFHCVCRRPGVDGEKYQKGTRVRLRLLDLELTS 151
Query: 594 RFLGSSTDLTL 626
RFLG++TD T+
Sbjct: 152 RFLGATTDTTV 162
>EF152584-1|ABO34073.1| 278|Homo sapiens PC1/MRPS28 fusion protein
protein.
Length = 278
Score = 89.4 bits (212), Expect = 9e-18
Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Frame = +3
Query: 252 SYSDSGNEIDKDISQEKLSGFAKAFEKQSQILE-NPEEEKSYTFASLLRNSKLMDLGDPV 428
++S G+ I K + K S K+FE++ + L+ +P+ +S FAS+LR+S L +G
Sbjct: 153 AFSSVGSVITKKLEDVKNSPTFKSFEEKVENLKGSPKNVES--FASMLRHSPLTQMGPAK 210
Query: 429 GKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGE 536
K VIG+IFH+VE+DLYIDFG KFHCVC RP + GE
Sbjct: 211 DKLVIGRIFHIVENDLYIDFGGKFHCVCRRPEVDGE 246
>Z26652-1|CAA81393.1| 993|Homo sapiens FLT3 receptor tyrosine
kinase precursor protein.
Length = 993
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 396 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTKGC 244
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>U02687-1|AAA18947.1| 993|Homo sapiens serine/threonine protein
kinase protein.
Length = 993
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 396 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTKGC 244
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>BC126350-1|AAI26351.1| 993|Homo sapiens fms-related tyrosine
kinase 3 protein.
Length = 993
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 396 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTKGC 244
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>BC036028-1|AAH36028.1| 596|Homo sapiens FLT3 protein protein.
Length = 596
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 396 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTKGC 244
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>AL591024-3|CAH70634.1| 996|Homo sapiens fms-related tyrosine
kinase 3 protein.
Length = 996
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 396 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTKGC 244
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>AL445262-1|CAI17231.1| 996|Homo sapiens fms-related tyrosine
kinase 3 protein.
Length = 996
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 396 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTKGC 244
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>AL356915-1|CAI12447.1| 996|Homo sapiens fms-related tyrosine
kinase 3 protein.
Length = 996
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 396 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTKGC 244
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +3
Query: 186 NGIEKSNHL--IRVLNLCSYSNIPSYSDSGNEIDKDISQEKLSGFAKAFEKQSQILEN-P 356
N +E ++H ++V +L N+ S + +SQE++ +A + +LE+
Sbjct: 1625 NAMENASHQASVQVESLQEQLNVVSKQRDETALQLSVSQEQVKQYALSLANLQMVLEHFQ 1684
Query: 357 EEEKSYTFASLLRNSKLMDLGDPVGKTVIGKIFHVVE 467
+EEK+ A L + +L+ + + GK+ + E
Sbjct: 1685 QEEKAMYSAELEKQKQLIAEWKKNAENLEGKVISLQE 1721
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +3
Query: 186 NGIEKSNHL--IRVLNLCSYSNIPSYSDSGNEIDKDISQEKLSGFAKAFEKQSQILEN-P 356
N +E ++H ++V +L N+ S + +SQE++ +A + +LE+
Sbjct: 1340 NAMENASHQASVQVESLQEQLNVVSKQRDETALQLSVSQEQVKQYALSLANLQMVLEHFQ 1399
Query: 357 EEEKSYTFASLLRNSKLMDLGDPVGKTVIGKIFHVVE 467
+EEK+ A L + +L+ + + GK+ + E
Sbjct: 1400 QEEKAMYSAELEKQKQLIAEWKKNAENLEGKVISLQE 1436
>AF011368-1|AAB84386.1| 761|Homo sapiens CEV14 protein.
Length = 761
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +3
Query: 186 NGIEKSNHL--IRVLNLCSYSNIPSYSDSGNEIDKDISQEKLSGFAKAFEKQSQILEN-P 356
N +E ++H ++V +L N+ S + +SQE++ +A + +LE+
Sbjct: 438 NAMENASHQASVQVESLQEQLNVVSKQRDETALQLSVSQEQVKQYALSLANLQMVLEHFQ 497
Query: 357 EEEKSYTFASLLRNSKLMDLGDPVGKTVIGKIFHVVE 467
+EEK+ A L + +L+ + + GK+ + E
Sbjct: 498 QEEKAMYSAELEKQKQLIAEWKKNAENLEGKVISLQE 534
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,264,533
Number of Sequences: 237096
Number of extensions: 1598387
Number of successful extensions: 2768
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2768
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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