Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17n11
         (578 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC037293-1|AAH37293.1|  430|Homo sapiens chromosome 3 open readi...    51   3e-06
AK024165-1|BAB14843.1|  182|Homo sapiens protein ( Homo sapiens ...    35   0.24 
AY358764-1|AAQ89124.1|  182|Homo sapiens EPQL1862 protein.             33   0.55 
AB065593-1|BAC05821.1|  312|Homo sapiens seven transmembrane hel...    32   1.7  

>BC037293-1|AAH37293.1|  430|Homo sapiens chromosome 3 open reading
           frame 58 protein.
          Length = 430

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
 Frame = +3

Query: 258 ELDRCPACYGVNVCPALYSNQITLESHTWSSI-----FNVKNIY---YGYTKT--KRRIV 407
           +L++CPAC+G + C    + Q+  E+  W  +      NVKN+Y   YG  +   +RR+V
Sbjct: 51  QLNKCPACFGTSWCRRFLNGQVVFEA--WGRLRLLDFLNVKNVYFAQYGEPREGGRRRVV 108

Query: 408 LKKLAHSSELKDFDSKLC 461
           LK+L    EL   D  +C
Sbjct: 109 LKRLGSQRELAQLDQSIC 126


>AK024165-1|BAB14843.1|  182|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14103 fis, clone MAMMA1001073. ).
          Length = 182

 Score = 34.7 bits (76), Expect = 0.24
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
 Frame = +3

Query: 261 LDRCPACYGVNVCPALYSNQIT----LESHTW---SSIFNVKNIYYGYTKTKRRIVLKKL 419
           LD+C AC G ++C   +  +I     L SH      S+ +    Y   +K  R + + +L
Sbjct: 57  LDKCNACIGTSICKKFFKEEIRSDNWLASHLGLPPDSLLSYPANYSDDSKIWRPVEIFRL 116

Query: 420 AHSSELKDFDSKLCSYWNLKKTCKPMNLLNVSNLDEK 530
               + +  D K+C+  +  KTC    +L  +   +K
Sbjct: 117 VSKYQNEISDRKICASASAPKTCSIERVLRKTERFQK 153


>AY358764-1|AAQ89124.1|  182|Homo sapiens EPQL1862 protein.
          Length = 182

 Score = 33.5 bits (73), Expect = 0.55
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
 Frame = +3

Query: 261 LDRCPACYGVNVCPALYSNQIT----LESHTW---SSIFNVKNIYYGYTKTKRRIVLKKL 419
           LD+C AC G ++C   +  +I     L SH      S+ +    Y   +K  R + + +L
Sbjct: 57  LDKCNACIGTSICKKFFKEEIRSDNWLASHLGLPPDSLLSYPANYSDDSKIWRPVEIFRL 116

Query: 420 AHSSELKDFDSKLCSYWNLKKTCKPMNLLNVSNLDEK 530
               + +  D ++C+  +  KTC    +L  +   +K
Sbjct: 117 VSKYQNEISDRRICASASAPKTCSIERVLRKTERFQK 153


>AB065593-1|BAC05821.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 24/113 (21%), Positives = 46/113 (40%)
 Frame = +3

Query: 165 IGFMTIVFVISFYISLLLFGDFKTPRVMYLTELDRCPACYGVNVCPALYSNQITLESHTW 344
           I F+T++  +   I + L     TP   +L  L  C  CY     P +  N ++    + 
Sbjct: 34  IYFITLLDNLGIIILIWLNAQLHTPMYFFLGNLSFCDICYSTVFAPKMLVNFLSKHKSST 93

Query: 345 SSIFNVKNIYYGYTKTKRRIVLKKLAHSSELKDFDSKLCSYWNLKKTCKPMNL 503
            S   +++  +    T + I+L  +A+   +   +  L +    +K C  M L
Sbjct: 94  FSGCVLQSFPFAVYVTTKDILLSMMAYDHYVAIANPLLYTVIMAQKVCIQMVL 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,039,817
Number of Sequences: 237096
Number of extensions: 1159289
Number of successful extensions: 2984
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2983
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)