Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17n11
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    25   0.71 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    25   0.71 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   2.2  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   3.8  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   3.8  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   3.8  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   3.8  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   3.8  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   3.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   5.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   5.0  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   6.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   6.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   6.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   6.7  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   6.7  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   8.8  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 87  SNRYNNRNMNDKIYSRML 140
           +N YNN N N K+Y  ++
Sbjct: 100 NNNYNNNNYNKKLYYNII 117


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 87  SNRYNNRNMNDKIYSRML 140
           +N YNN N N K+Y  ++
Sbjct: 100 NNNYNNNNYNKKLYYNII 117


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 279 CYGVNVCPALYSNQITLESHTWSSIFNVKN 368
           CY  +VC    S ++TL+ H     F   N
Sbjct: 371 CYTCDVCGKTLSTKLTLKRHKEQQHFQPLN 400


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 90  NRYNNRNMNDKIYSRM 137
           N YNN N N+  Y ++
Sbjct: 95  NNYNNNNYNNNNYKKL 110


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 90  NRYNNRNMNDKIYSRM 137
           N YNN N N+  Y ++
Sbjct: 95  NNYNNNNYNNNNYKKL 110


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 90  NRYNNRNMNDKIYSRM 137
           N YNN N N+  Y ++
Sbjct: 95  NNYNNNNYNNNNYKKL 110


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 90  NRYNNRNMNDKIYSRM 137
           N YNN N N+  Y ++
Sbjct: 95  NNYNNNNYNNNNYKKL 110


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 84  VSNRYNNRNMNDKIY 128
           +SN  NN N N K+Y
Sbjct: 93  ISNYNNNNNYNKKLY 107


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 84  VSNRYNNRNMNDKIY 128
           +SN  NN N N K+Y
Sbjct: 331 ISNYNNNNNYNKKLY 345


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 309 YSNQITLESHTWSSIFNVKNIYY 377
           YS+ I +E H       VK +YY
Sbjct: 278 YSSSIIMELHNIEGTHYVKIVYY 300


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 309 YSNQITLESHTWSSIFNVKNIYY 377
           YS+ I +E H       VK +YY
Sbjct: 293 YSSSIIMELHNIEGTHYVKIVYY 315


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 96  YNNRNMNDKIY 128
           YNN N N K+Y
Sbjct: 99  YNNNNYNKKLY 109


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 96  YNNRNMNDKIY 128
           YNN N N K+Y
Sbjct: 99  YNNNNYNKKLY 109


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 96  YNNRNMNDKIY 128
           YNN N N K+Y
Sbjct: 99  YNNNNYNKKLY 109


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 96  YNNRNMNDKIY 128
           YNN N N K+Y
Sbjct: 99  YNNNNYNKKLY 109


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 96  YNNRNMNDKIY 128
           YNN N N K+Y
Sbjct: 106 YNNNNYNKKLY 116


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 83  NSENITNYKNKLI 45
           N  NITN+KN  I
Sbjct: 159 NGNNITNFKNSNI 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,797
Number of Sequences: 438
Number of extensions: 2725
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)