Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17n07
(593 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003589-1|AAO39592.1| 796|Drosophila melanogaster LD03662p pro... 32 0.51
AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-P... 32 0.51
BT021400-1|AAX33548.1| 1098|Drosophila melanogaster LD13667p pro... 32 0.67
AF222744-1|AAG44254.1| 1098|Drosophila melanogaster RanBP16 prot... 32 0.67
AE014298-2289|AAF48541.3| 1098|Drosophila melanogaster CG33180-P... 32 0.67
AY058247-1|AAL13476.1| 340|Drosophila melanogaster GH01208p pro... 29 3.6
AE014134-1476|AAF52653.1| 340|Drosophila melanogaster CG17292-P... 29 3.6
AE014134-1475|AAF52652.1| 340|Drosophila melanogaster CG17292-P... 29 3.6
AY060817-1|AAL28365.1| 721|Drosophila melanogaster GH28787p pro... 28 8.3
AF139062-1|AAD39472.1| 721|Drosophila melanogaster origin recog... 28 8.3
AE013599-1658|AAM68599.1| 721|Drosophila melanogaster CG4088-PB... 28 8.3
AE013599-1657|AAF58411.1| 721|Drosophila melanogaster CG4088-PA... 28 8.3
>BT003589-1|AAO39592.1| 796|Drosophila melanogaster LD03662p
protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +3
Query: 135 HVKLYLNVYPD-DADQESELRRL*-----HHQHI*SRRERNTNQQHRSIPELHTYG 284
H +++LN P A Q+ ++ L HHQH ++ + + Q H+ P L TYG
Sbjct: 184 HTEVFLNPPPPPSAQQQLQIHSLVQNQGQHHQHSHPQQSQPSQQSHQQPPSLQTYG 239
>AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-PA
protein.
Length = 1784
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +3
Query: 135 HVKLYLNVYPD-DADQESELRRL*-----HHQHI*SRRERNTNQQHRSIPELHTYG 284
H +++LN P A Q+ ++ L HHQH ++ + + Q H+ P L TYG
Sbjct: 358 HTEVFLNPPPPPSAQQQLQIHSLVQNQGQHHQHSHPQQSQPSQQSHQQPPSLQTYG 413
>BT021400-1|AAX33548.1| 1098|Drosophila melanogaster LD13667p
protein.
Length = 1098
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 528 QLVLGLAVQRRVGLEVRFDDLLLVHVPVGAHFFITLAVLVLVNLLRYGFFD 376
+L+ GL++Q R+ + + L VP HF + V +L L +YG+FD
Sbjct: 64 KLIQGLSLQERIDIR-SYALNYLATVPNLQHFVVQALVSLLAKLTKYGWFD 113
>AF222744-1|AAG44254.1| 1098|Drosophila melanogaster RanBP16
protein.
Length = 1098
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 528 QLVLGLAVQRRVGLEVRFDDLLLVHVPVGAHFFITLAVLVLVNLLRYGFFD 376
+L+ GL++Q R+ + + L VP HF + V +L L +YG+FD
Sbjct: 64 KLIQGLSLQERIDIR-SYALNYLATVPNLQHFVVQALVSLLAKLTKYGWFD 113
>AE014298-2289|AAF48541.3| 1098|Drosophila melanogaster CG33180-PB
protein.
Length = 1098
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 528 QLVLGLAVQRRVGLEVRFDDLLLVHVPVGAHFFITLAVLVLVNLLRYGFFD 376
+L+ GL++Q R+ + + L VP HF + V +L L +YG+FD
Sbjct: 64 KLIQGLSLQERIDIR-SYALNYLATVPNLQHFVVQALVSLLAKLTKYGWFD 113
>AY058247-1|AAL13476.1| 340|Drosophila melanogaster GH01208p
protein.
Length = 340
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 102 LAHEQHMNIGEHVKLYLNVYPDDADQES 185
L ++H+++G++ LYL+ Y +D D ES
Sbjct: 49 LLEDEHLDLGKNTVLYLHGYLEDPDVES 76
>AE014134-1476|AAF52653.1| 340|Drosophila melanogaster CG17292-PB,
isoform B protein.
Length = 340
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 102 LAHEQHMNIGEHVKLYLNVYPDDADQES 185
L ++H+++G++ LYL+ Y +D D ES
Sbjct: 49 LLEDEHLDLGKNTVLYLHGYLEDPDVES 76
>AE014134-1475|AAF52652.1| 340|Drosophila melanogaster CG17292-PA,
isoform A protein.
Length = 340
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 102 LAHEQHMNIGEHVKLYLNVYPDDADQES 185
L ++H+++G++ LYL+ Y +D D ES
Sbjct: 49 LLEDEHLDLGKNTVLYLHGYLEDPDVES 76
>AY060817-1|AAL28365.1| 721|Drosophila melanogaster GH28787p
protein.
Length = 721
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 511 KTKDELVAAALHSAVKDFPDYKHCLQM 591
K + EL L+ A+ P+YK CLQM
Sbjct: 424 KLRRELYVNCLNRAIISTPEYKECLQM 450
>AF139062-1|AAD39472.1| 721|Drosophila melanogaster origin
recognition complex subunit3 protein.
Length = 721
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 511 KTKDELVAAALHSAVKDFPDYKHCLQM 591
K + EL L+ A+ P+YK CLQM
Sbjct: 424 KLRRELYVNCLNRAIISTPEYKECLQM 450
>AE013599-1658|AAM68599.1| 721|Drosophila melanogaster CG4088-PB,
isoform B protein.
Length = 721
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 511 KTKDELVAAALHSAVKDFPDYKHCLQM 591
K + EL L+ A+ P+YK CLQM
Sbjct: 424 KLRRELYVNCLNRAIISTPEYKECLQM 450
>AE013599-1657|AAF58411.1| 721|Drosophila melanogaster CG4088-PA,
isoform A protein.
Length = 721
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 511 KTKDELVAAALHSAVKDFPDYKHCLQM 591
K + EL L+ A+ P+YK CLQM
Sbjct: 424 KLRRELYVNCLNRAIISTPEYKECLQM 450
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,385,355
Number of Sequences: 53049
Number of extensions: 475517
Number of successful extensions: 1383
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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