Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17m24
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    26   0.24 
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    26   0.24 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   4.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.9  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   6.9  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 94  ETTNHPTDPRSNISKLGSYDPEKYVLDNVSSTVLTDESLTPGRP--PCLTQ 240
           +T  HP     ++  LG+ DP    +  VS+ V    SL  G P  PCLT+
Sbjct: 78  KTDKHPPKDFGDVDSLGNLDPANEFI--VSTRVRCGRSL-EGYPFNPCLTE 125


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 94  ETTNHPTDPRSNISKLGSYDPEKYVLDNVSSTVLTDESLTPGRP--PCLTQ 240
           +T  HP     ++  LG+ DP    +  VS+ V    SL  G P  PCLT+
Sbjct: 94  KTDKHPPKDFGDVDSLGNLDPANEFI--VSTRVRCGRSL-EGYPFNPCLTE 141


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 549 QANTCSCRDCTKL 587
           QA++CSC DC ++
Sbjct: 322 QASSCSCLDCDEI 334


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 259 LQPLTRELAEIPPKPTIDELPGPVIERMVQK 351
           + PL      +P  PT+  + GP+  R+  K
Sbjct: 429 MPPLPNMPGSMPTMPTMPSMAGPIRRRISDK 459


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 11  DIIKPQAMKLF--KNNFFYARTICNIS*KWKRQIIQ 112
           D IK   ++ F  KN  FY R I  +  +W++ I Q
Sbjct: 300 DDIKSYLIQFFANKNQKFYERGIMMLPERWQKVIDQ 335


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 254 NFYSHSRENLPKY 292
           ++Y   +ENLPKY
Sbjct: 426 DYYHKYKENLPKY 438


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 254 NFYSHSRENLPKY 292
           ++Y   +ENLPKY
Sbjct: 426 DYYHKYKENLPKY 438


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 254 NFYSHSRENLPKY 292
           ++Y   +ENLPKY
Sbjct: 52  DYYHKYKENLPKY 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,763
Number of Sequences: 438
Number of extensions: 4216
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)