Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17m21
         (553 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23171-1|AAC46702.2|  334|Caenorhabditis elegans Serpentine rece...    29   2.9  
Z83226-4|CAI79261.2|  206|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>U23171-1|AAC46702.2|  334|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 55 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 172 CFPFVLAMFIHFLLIVNYNQNLMFLRFSIRRSQANAILLMHSHDSQ 35
           CFP  +  FI F  IV Y Q L+ L F  R+++   I++   H S+
Sbjct: 281 CFPSFVDPFISFYFIVPYRQALLGL-FKCRKTKPLNIVITVRHLSK 325


>Z83226-4|CAI79261.2|  206|Caenorhabditis elegans Hypothetical
           protein F43D2.6 protein.
          Length = 206

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 288 LIGVVVGALMTSICCLLCCTNDSW 217
           L+ +V+  L++  CCLLC  N  W
Sbjct: 95  LVSIVLSVLLSFFCCLLC--NGCW 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,494,325
Number of Sequences: 27780
Number of extensions: 216340
Number of successful extensions: 625
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)