Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17m21
         (553 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    25   0.51 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   2.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   6.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.3  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
 Frame = +2

Query: 164 WKALATVKSFDLGISASHHESFVQQSRQQIDVINAPTTTPISLLVQSLVKQLCSLLQKDS 343
           W  +A V+ + L I  +  +SF  Q       +  P  T  ++  +S   Q   L    S
Sbjct: 199 WVYIADVEGYALIIYNNADDSF--QRLTSSTFVYDPRYTKYTINDESFSLQDGILGMALS 256

Query: 344 IIANQLYNKICEKLHSMNLIDNS-YAMGEFEAMRSQYQRALYQLVTVASGTEI 499
                LY       H++N ++   +  G+F+A   QYQ A   L T AS   I
Sbjct: 257 HKTQNLYYSAMSS-HNLNYVNTKQFTQGKFQANDIQYQGASDILWTQASAKAI 308


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 176 ATVKSFDLGISASHHESFVQQSRQQIDVINA--PTTT 280
           + VKS +L +     E+ ++   +QID + A  P TT
Sbjct: 323 SVVKSSELAVRIQRQENNIRPMVKQIDTVAAEWPATT 359


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 425 LP*HTNCQSSSYYE 384
           LP H NC SS + E
Sbjct: 61  LPGHINCDSSKFEE 74


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 344 YCLFVTMNTIV 312
           YCLF  +NTIV
Sbjct: 148 YCLFSFLNTIV 158


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 415 IRIVNQVHTMKFLT 374
           I IVNQ H ++F+T
Sbjct: 480 IGIVNQFHILQFIT 493


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 231 TNDSW*LADMPKSKDFTVANAFHLSWL 151
           TNDS        S DF   N+  LSWL
Sbjct: 214 TNDSTSSKTDDDSIDFDRMNSLGLSWL 240


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 231 TNDSW*LADMPKSKDFTVANAFHLSWL 151
           TNDS        S DF   N+  LSWL
Sbjct: 252 TNDSTSSKTDDDSIDFDRMNSLGLSWL 278


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,427
Number of Sequences: 438
Number of extensions: 2605
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)