Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17m18
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132952-17|CAJ76970.1| 222|Caenorhabditis elegans Hypothetical... 34 0.10
AL132952-18|CAJ76971.1| 174|Caenorhabditis elegans Hypothetical... 33 0.14
AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical ... 31 0.97
Z83123-7|CAB05612.2| 332|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z69903-6|CAE17836.2| 384|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF000262-3|AAK21363.1| 118|Caenorhabditis elegans Saposin-like ... 29 3.9
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z75533-8|CAA99821.1| 464|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF016683-6|AAY55869.1| 130|Caenorhabditis elegans Hypothetical ... 27 9.1
>AL132952-17|CAJ76970.1| 222|Caenorhabditis elegans Hypothetical
protein Y51H4A.15a protein.
Length = 222
Score = 33.9 bits (74), Expect = 0.10
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Frame = +2
Query: 71 NKEMLYDDFKPIVDLVLNNWTALQLAVEHGMGAPGG-EKTAQLMAVYIARYCVENVVDRD 247
N + D + L +W+ QLA+++ G EK + V + + +
Sbjct: 48 NMSINADVLRNFTGRTLKSWSGYQLALDNSCGGDETREKDKWFLEVLCEQLTTTRGLKAE 107
Query: 248 ELAEVIEDLMDEEFDTVCHDESPKEIANXXXXXXXXXKEGHHDELRARIEAMPKCQKWLS 427
EL E + +++ +FD + D+S +IA K + ++ + +P ++ L
Sbjct: 108 ELEEWLTNILYHDFDLILDDDSSYQIAFFLLEGFGYIKNENEAGIQQLLSKLPSDEE-LE 166
Query: 428 QPIHESV 448
+ ESV
Sbjct: 167 KAKRESV 173
>AL132952-18|CAJ76971.1| 174|Caenorhabditis elegans Hypothetical
protein Y51H4A.15b protein.
Length = 174
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = +2
Query: 119 LNNWTALQLAVEHGMGAPGG-EKTAQLMAVYIARYCVENVVDRDELAEVIEDLMDEEFDT 295
L +W+ QLA+++ G EK + V + + +EL E + +++ +FD
Sbjct: 16 LKSWSGYQLALDNSCGGDETREKDKWFLEVLCEQLTTTRGLKAEELEEWLTNILYHDFDL 75
Query: 296 VCHDESPKEIANXXXXXXXXXKEGHHDELRARIEAMPKCQKWLSQPIHESV 448
+ D+S +IA K + ++ + +P ++ L + ESV
Sbjct: 76 ILDDDSSYQIAFFLLEGFGYIKNENEAGIQQLLSKLPSDEE-LEKAKRESV 125
>AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical
protein M151.7 protein.
Length = 416
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -1
Query: 272 DLLSLQPTHLYPLHFQHNILLYTLPLTVPSFRPLELPYHVQQLVVKLSS 126
D L +HLY L N +L LP+ +P F P++ P H LSS
Sbjct: 4 DFLLQDFSHLYGL----NPMLQPLPMGLPPFVPMDFPNHASSTAPLLSS 48
>Z83123-7|CAB05612.2| 332|Caenorhabditis elegans Hypothetical
protein T04A11.9 protein.
Length = 332
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/38 (23%), Positives = 25/38 (65%)
Frame = -1
Query: 236 LHFQHNILLYTLPLTVPSFRPLELPYHVQQLVVKLSSY 123
++F + +++Y + LT+ P++LP+ +++ K+ +Y
Sbjct: 122 IYFSYALMIYPVLLTIVRITPIQLPHRHREINSKILAY 159
>Z69903-6|CAE17836.2| 384|Caenorhabditis elegans Hypothetical
protein F46F2.5 protein.
Length = 384
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 224 VENVVDRDELAEVIEDLMDEEFDTVCHDESPKEIAN 331
+E + +R+ L EVIED + E FD + + IAN
Sbjct: 300 IEIIEEREALLEVIEDALGETFDRYSRVRTNQIIAN 335
>AF000262-3|AAK21363.1| 118|Caenorhabditis elegans Saposin-like
protein family protein15 protein.
Length = 118
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +2
Query: 74 KEMLYDDFKPIVDLVLNNWTALQLAVEHG--MGAPGGEKTAQLMAVYIARYCVENVVDRD 247
K+M D KP+ L +N L +EHG + A + + + ++ C E V++++
Sbjct: 23 KKMHSDTSKPLCGLCVNVVKQLDQVLEHGGDIEAAVDKFCKEDVPSFMVDMC-EKVIEKN 81
Query: 248 ELAEVIEDLMD-EEFDTVCHD 307
L +I L D EE D +C D
Sbjct: 82 -LEYIINKLKDHEEADKICTD 101
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 518 PENVSNVDEIGKDKQDSEPMDEDVEPGWTVVRT 616
P N N D+IG +Q+ E D P W +RT
Sbjct: 68 PTNPKNTDQIGLSEQELEQFRND--PCWKFIRT 98
>Z75533-8|CAA99821.1| 464|Caenorhabditis elegans Hypothetical
protein C54G4.9 protein.
Length = 464
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/61 (24%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 53 FNKSHKNKEMLYDDFKPIVDLVLNNW-TALQLAVEHGMGAPGGEKTAQLMAVYIARYCVE 229
FN+ +K E++ P +D ++ W AL++ +G+G ++A+L+ +RY ++
Sbjct: 243 FNQIYKRMELIPQLEAPEIDKIVEFWLAALRIFNGYGIGMNDITESAKLLEKTASRYSLK 302
Query: 230 N 232
+
Sbjct: 303 S 303
>AF016683-6|AAY55869.1| 130|Caenorhabditis elegans Hypothetical
protein K09F6.11 protein.
Length = 130
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 56 NKSHKNKEMLYDDFKPIVDLVLNNWTALQLAVEHGMGAPGGEK 184
NK H N +M FKP +LV+N W L +V G G ++
Sbjct: 76 NKVHPNNQMR-SLFKPTRELVINEWEHLVESVFPGSFYYGSQR 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,252,894
Number of Sequences: 27780
Number of extensions: 247603
Number of successful extensions: 804
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -