Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17m17
         (415 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   1.4  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   4.2  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   7.3  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   7.3  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   7.3  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   7.3  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   7.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   9.6  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              20   9.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   9.6  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 118 SSFSNKTKEQDGNND 162
           + F+NK K+ D NND
Sbjct: 101 TGFNNKNKDGDDNND 115


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 112 IYSSFSNKTKEQDGNNDELRIFSREKLY 195
           I SS SNKT   + N +     + +KLY
Sbjct: 81  IISSLSNKTIHNNNNYNNNNYNNYKKLY 108


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 112 IYSSFSNKTKEQDGNN 159
           I SS SNKT   + NN
Sbjct: 81  IISSLSNKTIHNNNNN 96


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 112 IYSSFSNKTKEQDGNN 159
           I SS SNKT   + NN
Sbjct: 81  IISSLSNKTIHNNNNN 96


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 112 IYSSFSNKTKEQDGNN 159
           I SS SNKT   + NN
Sbjct: 81  IISSLSNKTIHNNNNN 96


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 112 IYSSFSNKTKEQDGNN 159
           I SS SNKT   + NN
Sbjct: 81  IISSLSNKTIHNNNNN 96


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 112 IYSSFSNKTKEQDGNN 159
           I SS SNKT   + NN
Sbjct: 314 IISSLSNKTIHNNNNN 329


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 151 GNNDELRIFSR 183
           GN+D+LR+ SR
Sbjct: 345 GNHDQLRLVSR 355


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 290 ECNLEKYSSLHKMSTADENTSTLLGSFF 373
           EC ++K+S + K    +E+ S  +   F
Sbjct: 64  ECAMKKFSFVDKDGNFNEHVSREIAKIF 91


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 151 GNNDELRIFSR 183
           GN+D+LR+ SR
Sbjct: 345 GNHDQLRLVSR 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,865
Number of Sequences: 438
Number of extensions: 2033
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)