Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17m15
         (202 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   1.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   3.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   7.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    18   9.8  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 99  KVVGFRDHVCKSSNKNN 149
           K++G  +++C S N +N
Sbjct: 20  KIIGLHNNMCTSLNLSN 36


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 4/24 (16%)
 Frame = -2

Query: 156 NPHYFYY*ICRHD----LGIPPPY 97
           NP + Y  +C        G+PPPY
Sbjct: 471 NPSHMYRAVCGRIENTIQGLPPPY 494


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 69  EFKIASRQKYAGLCYSHTYR 10
           EF+   R +YA    + TYR
Sbjct: 597 EFRRQERMRYAAPHKAFTYR 616


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = +3

Query: 6   LCDMCESNTILH 41
           +CD CE    +H
Sbjct: 469 VCDQCEEYEYVH 480


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,333
Number of Sequences: 438
Number of extensions: 895
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2659293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)