Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17m13
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051812-1|AAH51812.1| 127|Homo sapiens LIMD2 protein protein. 43 0.001
BC004400-1|AAH04400.1| 127|Homo sapiens LIM domain containing 2... 43 0.001
AK097519-1|BAC05086.1| 519|Homo sapiens protein ( Homo sapiens ... 43 0.001
AK092301-1|BAC03855.1| 127|Homo sapiens protein ( Homo sapiens ... 43 0.001
CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein. 40 0.010
AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA seq... 40 0.010
AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting wi... 40 0.010
AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein. 40 0.010
BC110815-1|AAI10816.1| 759|Homo sapiens LIM domain and actin bi... 38 0.024
AK222971-1|BAD96691.1| 759|Homo sapiens epithelial protein lost... 38 0.024
AK023649-1|BAB14625.1| 457|Homo sapiens protein ( Homo sapiens ... 38 0.024
AK000372-1|BAA91120.1| 704|Homo sapiens protein ( Homo sapiens ... 38 0.024
AK000335-1|BAA91092.1| 599|Homo sapiens protein ( Homo sapiens ... 38 0.024
AF198455-1|AAF23756.1| 600|Homo sapiens epithelial protein lost... 38 0.024
AF198454-1|AAF23755.1| 759|Homo sapiens epithelial protein lost... 38 0.024
AF157325-1|AAF67491.1| 457|Homo sapiens sterol regulatory eleme... 38 0.024
AB209512-1|BAD92749.1| 769|Homo sapiens epithelial protein lost... 38 0.024
BC001247-1|AAH01247.2| 660|Homo sapiens LIMA1 protein protein. 38 0.032
AK000057-1|BAA90914.1| 456|Homo sapiens protein ( Homo sapiens ... 38 0.032
AY555744-1|AAS66890.1| 166|Homo sapiens LIM-only isoform D prot... 36 0.17
AY555743-1|AAS66889.1| 217|Homo sapiens LIM-only isoform C prot... 36 0.17
AY555742-1|AAS66888.1| 205|Homo sapiens LIM-only isoform B prot... 36 0.17
AY555741-1|AAS66887.1| 204|Homo sapiens LIM-only isoform A prot... 36 0.17
AL583834-11|CAM20552.1| 217|Homo sapiens protein ( amily 22 (or... 36 0.17
AL583834-10|CAI14469.1| 204|Homo sapiens protein ( amily 22 (or... 36 0.17
AL450998-6|CAH70854.1| 373|Homo sapiens filamin binding LIM pro... 36 0.17
U60116-1|AAC04466.2| 280|Homo sapiens skeletal muscle LIM-prote... 35 0.30
M76378-1|AAA58431.1| 193|Homo sapiens cysteine-rich protein pro... 34 0.39
M33146-1|AAA35720.1| 193|Homo sapiens protein ( Human cysteine-... 34 0.39
BT019520-1|AAV38327.1| 193|Homo sapiens cysteine and glycine-ri... 34 0.39
BC032493-1|AAH32493.1| 193|Homo sapiens cysteine and glycine-ri... 34 0.39
BC004265-1|AAH04265.1| 168|Homo sapiens Similar to cysteine and... 34 0.39
AL133035-1|CAB61365.1| 200|Homo sapiens hypothetical protein pr... 34 0.39
AK131508-1|BAD18652.1| 191|Homo sapiens protein ( Homo sapiens ... 34 0.39
CR457425-1|CAG33706.1| 280|Homo sapiens FHL3 protein. 34 0.52
BT007052-1|AAP35701.1| 280|Homo sapiens four and a half LIM dom... 34 0.52
BC019895-1|AAH19895.1| 373|Homo sapiens FBLIM1 protein protein. 34 0.52
BC011697-1|AAH11697.1| 280|Homo sapiens four and a half LIM dom... 34 0.52
BC001351-1|AAH01351.1| 280|Homo sapiens four and a half LIM dom... 34 0.52
AY180161-1|AAO49012.1| 373|Homo sapiens migfilin protein. 34 0.52
AL603790-6|CAH69931.1| 280|Homo sapiens four and a half LIM dom... 34 0.52
AF459643-1|AAO15549.1| 374|Homo sapiens filamin-binding LIM pro... 34 0.52
AF133732-1|AAF61376.1| 280|Homo sapiens LIM-only protein FHL3 p... 34 0.52
AL450998-5|CAH70853.1| 276|Homo sapiens filamin binding LIM pro... 33 0.68
AL138781-3|CAI16879.1| 397|Homo sapiens LIM homeobox 3 protein. 33 1.2
AF367089-1|AAL26314.1| 397|Homo sapiens LIM homeobox protein 3 ... 33 1.2
AF156888-1|AAF36808.1| 397|Homo sapiens LIM homeobox protein 3 ... 33 1.2
U63721-3|AAC13886.1| 633|Homo sapiens LIM-kinase protein. 32 1.6
U63721-2|AAC13885.1| 647|Homo sapiens LIM-kinase protein. 32 1.6
U62293-2|AAB17546.1| 633|Homo sapiens alternatively spliced LIM... 32 1.6
U62293-1|AAB17545.1| 647|Homo sapiens LIM-kinase1 protein. 32 1.6
D26309-1|BAA05371.1| 647|Homo sapiens LIM kinase protein. 32 1.6
AF134379-1|AAD25742.1| 305|Homo sapiens LIM domain kinase 1 spl... 32 1.6
AB209560-1|BAD92797.1| 1011|Homo sapiens polymerase (DNA directe... 32 1.6
AK027444-1|BAB55115.1| 276|Homo sapiens protein ( Homo sapiens ... 32 2.1
BC103938-1|AAI03939.1| 362|Homo sapiens LIM homeobox 6 protein. 31 3.6
BC103937-1|AAI03938.1| 363|Homo sapiens LIM homeobox 6 protein. 31 3.6
BC103936-1|AAI03937.1| 348|Homo sapiens LIM homeobox 6 protein. 31 3.6
AL162424-5|CAO03566.1| 377|Homo sapiens LIM homeobox 6 protein. 31 3.6
AL162424-4|CAO03565.1| 392|Homo sapiens LIM homeobox 6 protein. 31 3.6
AL162424-3|CAI14704.1| 348|Homo sapiens LIM homeobox 6 protein. 31 3.6
AL162424-2|CAI14703.1| 363|Homo sapiens LIM homeobox 6 protein. 31 3.6
AB031042-1|BAA83423.1| 348|Homo sapiens LIM-homeodomain (LHX) p... 31 3.6
AB031041-1|BAA83422.1| 363|Homo sapiens LIM-homeodomain (LHX) p... 31 3.6
BC014501-1|AAH14501.1| 172|Homo sapiens FHL3 protein protein. 30 6.4
U90654-1|AAB86592.1| 341|Homo sapiens zinc-finger domain-contai... 30 8.4
CR456364-1|CAG30250.1| 948|Homo sapiens Em:AC016026.2 protein. 30 8.4
BX537887-1|CAD97883.1| 648|Homo sapiens hypothetical protein pr... 30 8.4
BC085009-1|AAH85009.1| 285|Homo sapiens MICAL3 protein protein. 30 8.4
BC043151-1|AAH43151.1| 648|Homo sapiens zinc finger protein 595... 30 8.4
BC036110-1|AAH36110.1| 648|Homo sapiens zinc finger protein 595... 30 8.4
AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein. 30 8.4
AL138781-2|CAI16878.1| 402|Homo sapiens LIM homeobox 3 protein. 30 8.4
AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein. 30 8.4
AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein. 30 8.4
AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein. 30 8.4
AK126902-1|BAC86743.1| 247|Homo sapiens protein ( Homo sapiens ... 30 8.4
AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein. 30 8.4
AF156889-1|AAF36809.1| 402|Homo sapiens LIM homeobox protein 3 ... 30 8.4
AF144237-1|AAD33924.1| 797|Homo sapiens LOMP protein protein. 30 8.4
AF092557-2|AAC96299.1| 120|Homo sapiens LIM domain only 7 protein. 30 8.4
AB037785-1|BAA92602.1| 811|Homo sapiens KIAA1364 protein protein. 30 8.4
>BC051812-1|AAH51812.1| 127|Homo sapiens LIMD2 protein protein.
Length = 127
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 413 GDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNI 592
G + SKS + K + C+ C + + ++ DK FH+ C C CHT S
Sbjct: 20 GSSTVQRSKSFSLRAQVKET-CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGS 78
Query: 593 HIC-YGQVFCEPCFQ 634
+ +G+ +C+P FQ
Sbjct: 79 YAALHGEFYCKPHFQ 93
>BC004400-1|AAH04400.1| 127|Homo sapiens LIM domain containing 2
protein.
Length = 127
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 413 GDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNI 592
G + SKS + K + C+ C + + ++ DK FH+ C C CHT S
Sbjct: 20 GSSTVQRSKSFSLRAQVKET-CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGS 78
Query: 593 HIC-YGQVFCEPCFQ 634
+ +G+ +C+P FQ
Sbjct: 79 YAALHGEFYCKPHFQ 93
>AK097519-1|BAC05086.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ40200 fis, clone TESTI2020071, weakly similar to
Mus musculus epithelial protein lost in neoplasm-a
(Eplin) mRNA. ).
Length = 519
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPS-SNIHICYGQVFCEPCFQ 634
+ +C C + + + DKQ FH C +C+ C++ S N +GQ++C+P F+
Sbjct: 399 KEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFK 455
>AK092301-1|BAC03855.1| 127|Homo sapiens protein ( Homo sapiens
cDNA FLJ34982 fis, clone OCBBF2001186, moderately
similar to Mus musculus epithelial protein lost in
neoplasm-a (Eplin) mRNA. ).
Length = 127
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 413 GDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNI 592
G + SKS + K + C+ C + + ++ DK FH+ C C CHT S
Sbjct: 20 GSSTVQRSKSFSLRAQVKET-CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGS 78
Query: 593 HIC-YGQVFCEPCFQ 634
+ +G+ +C+P FQ
Sbjct: 79 YAALHGEFYCKPHFQ 93
>CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein.
Length = 863
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 568
+G+ + S SE G T S C+ C Q ++ + D + +H HC +C C
Sbjct: 142 QGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRC 194
>AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA
sequence from clone RP5-1014D13 on chromosome
22q13.1-13.2. ).
Length = 863
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 568
+G+ + S SE G T S C+ C Q ++ + D + +H HC +C C
Sbjct: 142 QGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRC 194
>AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting with
Rab13 protein.
Length = 863
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 568
+G+ + S SE G T S C+ C Q ++ + D + +H HC +C C
Sbjct: 142 QGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRC 194
>AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein.
Length = 791
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 568
+G+ + S SE G T S C+ C Q ++ + D + +H HC +C C
Sbjct: 70 QGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRC 122
>BC110815-1|AAI10816.1| 759|Homo sapiens LIM domain and actin
binding 1 protein.
Length = 759
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSN 589
E P A K +A R C C + + ++ ++Q FH C +C +C+ S
Sbjct: 372 ESSPPKAMKKFQAPA----RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLG 427
Query: 590 IHI-CYGQVFCEPCF 631
+ +G+++C+P F
Sbjct: 428 TYASLHGRIYCKPHF 442
>AK222971-1|BAD96691.1| 759|Homo sapiens epithelial protein lost in
neoplasm beta variant protein.
Length = 759
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSN 589
E P A K +A R C C + + ++ ++Q FH C +C +C+ S
Sbjct: 372 ESSPPKAMKKFQAPA----RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLG 427
Query: 590 IHI-CYGQVFCEPCF 631
+ +G+++C+P F
Sbjct: 428 TYASLHGRIYCKPHF 442
>AK023649-1|BAB14625.1| 457|Homo sapiens protein ( Homo sapiens
cDNA FLJ13587 fis, clone PLACE1009246, weakly similar to
POLLEN SPECIFIC PROTEIN SF3. ).
Length = 457
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSN 589
E P A K +A R C C + + ++ ++Q FH C +C +C+ S
Sbjct: 70 ESSPPKAMKKFQAPA----RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLG 125
Query: 590 IHI-CYGQVFCEPCF 631
+ +G+++C+P F
Sbjct: 126 TYASLHGRIYCKPHF 140
>AK000372-1|BAA91120.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ20365 fis, clone HEP17877. ).
Length = 704
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSN 589
E P A K +A R C C + + ++ ++Q FH C +C +C+ S
Sbjct: 372 ESSPPKAMKKFQAPA----RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLG 427
Query: 590 IHI-CYGQVFCEPCF 631
+ +G+++C+P F
Sbjct: 428 TYASLHGRIYCKPHF 442
>AK000335-1|BAA91092.1| 599|Homo sapiens protein ( Homo sapiens
cDNA FLJ20328 fis, clone HEP10039. ).
Length = 599
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSN 589
E P A K +A R C C + + ++ ++Q FH C +C +C+ S
Sbjct: 212 ESSPPKAMKKFQAPA----RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLG 267
Query: 590 IHI-CYGQVFCEPCF 631
+ +G+++C+P F
Sbjct: 268 TYASLHGRIYCKPHF 282
>AF198455-1|AAF23756.1| 600|Homo sapiens epithelial protein lost in
neoplasm alpha protein.
Length = 600
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSN 589
E P A K +A R C C + + ++ ++Q FH C +C +C+ S
Sbjct: 213 ESSPPKAMKKFQAPA----RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLG 268
Query: 590 IHI-CYGQVFCEPCF 631
+ +G+++C+P F
Sbjct: 269 TYASLHGRIYCKPHF 283
>AF198454-1|AAF23755.1| 759|Homo sapiens epithelial protein lost in
neoplasm beta protein.
Length = 759
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSN 589
E P A K +A R C C + + ++ ++Q FH C +C +C+ S
Sbjct: 372 ESSPPKAMKKFQAPA----RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLG 427
Query: 590 IHI-CYGQVFCEPCF 631
+ +G+++C+P F
Sbjct: 428 TYASLHGRIYCKPHF 442
>AF157325-1|AAF67491.1| 457|Homo sapiens sterol regulatory element
binding protein 3 protein.
Length = 457
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSN 589
E P A K +A R C C + + ++ ++Q FH C +C +C+ S
Sbjct: 70 ESSPPKAMKKFQAPA----RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLG 125
Query: 590 IHI-CYGQVFCEPCF 631
+ +G+++C+P F
Sbjct: 126 TYASLHGRIYCKPHF 140
>AB209512-1|BAD92749.1| 769|Homo sapiens epithelial protein lost in
neoplasm beta variant protein.
Length = 769
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSN 589
E P A K +A R C C + + ++ ++Q FH C +C +C+ S
Sbjct: 382 ESSPPKAMKKFQAPA----RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLG 437
Query: 590 IHI-CYGQVFCEPCF 631
+ +G+++C+P F
Sbjct: 438 TYASLHGRIYCKPHF 452
>BC001247-1|AAH01247.2| 660|Homo sapiens LIMA1 protein protein.
Length = 660
Score = 37.9 bits (84), Expect = 0.032
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCF 631
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 288 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 343
>AK000057-1|BAA90914.1| 456|Homo sapiens protein ( Homo sapiens
cDNA FLJ20050 fis, clone COL00688. ).
Length = 456
Score = 37.9 bits (84), Expect = 0.032
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCF 631
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 84 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 139
>AY555744-1|AAS66890.1| 166|Homo sapiens LIM-only isoform D
protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.17
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 476 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 631
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AY555743-1|AAS66889.1| 217|Homo sapiens LIM-only isoform C
protein.
Length = 217
Score = 35.5 bits (78), Expect = 0.17
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 476 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 631
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AY555742-1|AAS66888.1| 205|Homo sapiens LIM-only isoform B
protein.
Length = 205
Score = 35.5 bits (78), Expect = 0.17
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 476 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 631
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AY555741-1|AAS66887.1| 204|Homo sapiens LIM-only isoform A
protein.
Length = 204
Score = 35.5 bits (78), Expect = 0.17
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 476 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 631
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AL583834-11|CAM20552.1| 217|Homo sapiens protein ( amily 22
(organic anion ).).
Length = 217
Score = 35.5 bits (78), Expect = 0.17
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 476 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 631
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AL583834-10|CAI14469.1| 204|Homo sapiens protein ( amily 22
(organic anion ).).
Length = 204
Score = 35.5 bits (78), Expect = 0.17
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 476 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 631
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AL450998-6|CAH70854.1| 373|Homo sapiens filamin binding LIM
protein 1 protein.
Length = 373
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 440 SEASEGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQV 613
+E E +C+ C + ++ +E K+ +H+ C C C + + + G+
Sbjct: 171 AEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRP 230
Query: 614 FCEPCFQ 634
CEPC+Q
Sbjct: 231 LCEPCYQ 237
>U60116-1|AAC04466.2| 280|Homo sapiens skeletal muscle LIM-protein
FHL3 protein.
Length = 280
Score = 34.7 bits (76), Expect = 0.30
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 470 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 643
S CS C + + + K+E Q +H HC C C S + G +C PC++++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCIGCEQPLGSRPFVPDKGAHYCVPCYENNF 158
Query: 644 LHR 652
R
Sbjct: 159 APR 161
>M76378-1|AAA58431.1| 193|Homo sapiens cysteine-rich protein
protein.
Length = 193
Score = 34.3 bits (75), Expect = 0.39
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 595
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 103 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 159
Query: 596 ICYGQVFCEPCF 631
G+++C+ C+
Sbjct: 160 DKDGEIYCKGCY 171
>M33146-1|AAA35720.1| 193|Homo sapiens protein ( Human
cysteine-rich peptide mRNA, complete cds. ).
Length = 193
Score = 34.3 bits (75), Expect = 0.39
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 595
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 103 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 159
Query: 596 ICYGQVFCEPCF 631
G+++C+ C+
Sbjct: 160 DKDGEIYCKGCY 171
>BT019520-1|AAV38327.1| 193|Homo sapiens cysteine and glycine-rich
protein 1 protein.
Length = 193
Score = 34.3 bits (75), Expect = 0.39
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 595
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 103 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 159
Query: 596 ICYGQVFCEPCF 631
G+++C+ C+
Sbjct: 160 DKDGEIYCKGCY 171
>BC032493-1|AAH32493.1| 193|Homo sapiens cysteine and glycine-rich
protein 1 protein.
Length = 193
Score = 34.3 bits (75), Expect = 0.39
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 595
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 103 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 159
Query: 596 ICYGQVFCEPCF 631
G+++C+ C+
Sbjct: 160 DKDGEIYCKGCY 171
>BC004265-1|AAH04265.1| 168|Homo sapiens Similar to cysteine and
glycine-rich protein 1 protein.
Length = 168
Score = 34.3 bits (75), Expect = 0.39
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 595
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 78 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 134
Query: 596 ICYGQVFCEPCF 631
G+++C+ C+
Sbjct: 135 DKDGEIYCKGCY 146
>AL133035-1|CAB61365.1| 200|Homo sapiens hypothetical protein
protein.
Length = 200
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 452 EGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQVFCEP 625
E +C+ C + ++ +E K+ +H+ C C C + + + G+ CEP
Sbjct: 2 EKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEP 61
Query: 626 CFQ 634
C+Q
Sbjct: 62 CYQ 64
>AK131508-1|BAD18652.1| 191|Homo sapiens protein ( Homo sapiens
cDNA FLJ16726 fis, clone UTERU3014791. ).
Length = 191
Score = 34.3 bits (75), Expect = 0.39
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 595
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 101 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 157
Query: 596 ICYGQVFCEPCF 631
G+++C+ C+
Sbjct: 158 DKDGEIYCKGCY 169
>CR457425-1|CAG33706.1| 280|Homo sapiens FHL3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 470 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 637
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>BT007052-1|AAP35701.1| 280|Homo sapiens four and a half LIM
domains 3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 470 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 637
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>BC019895-1|AAH19895.1| 373|Homo sapiens FBLIM1 protein protein.
Length = 373
Score = 33.9 bits (74), Expect = 0.52
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 440 SEASEGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQV 613
+E E +C+ C + + +E K+ +H+ C C C + + + G+
Sbjct: 171 AEPVEKGASTDICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRP 230
Query: 614 FCEPCFQ 634
CEPC+Q
Sbjct: 231 LCEPCYQ 237
>BC011697-1|AAH11697.1| 280|Homo sapiens four and a half LIM
domains 3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 470 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 637
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>BC001351-1|AAH01351.1| 280|Homo sapiens four and a half LIM
domains 3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 470 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 637
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>AY180161-1|AAO49012.1| 373|Homo sapiens migfilin protein.
Length = 373
Score = 33.9 bits (74), Expect = 0.52
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 440 SEASEGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQV 613
+E E +C+ C + + +E K+ +H+ C C C + + + G+
Sbjct: 171 AEPVEKGASTDICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRP 230
Query: 614 FCEPCFQ 634
CEPC+Q
Sbjct: 231 LCEPCYQ 237
>AL603790-6|CAH69931.1| 280|Homo sapiens four and a half LIM
domains 3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 470 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 637
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>AF459643-1|AAO15549.1| 374|Homo sapiens filamin-binding LIM
protein-1 protein.
Length = 374
Score = 33.9 bits (74), Expect = 0.52
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 440 SEASEGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQV 613
+E E +C+ C + + +E K+ +H+ C C C + + + G+
Sbjct: 171 AEPVEKGASTDICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRP 230
Query: 614 FCEPCFQ 634
CEPC+Q
Sbjct: 231 LCEPCYQ 237
>AF133732-1|AAF61376.1| 280|Homo sapiens LIM-only protein FHL3
protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 470 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 637
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 464 KRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYG-QVFCEPCFQ 634
K S C R + + + + + +H +C C C T + G QV C+ CFQ
Sbjct: 220 KCSSCKRPIVGLGGGKYVSFEDRHWHHNCFSCARCSTSLVGQGFVPDGDQVLCQGCFQ 277
>AL450998-5|CAH70853.1| 276|Homo sapiens filamin binding LIM
protein 1 protein.
Length = 276
Score = 33.5 bits (73), Expect = 0.68
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 473 VCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQVFCEPCFQ 634
+C+ C + ++ +E K+ +H+ C C C + + + G+ CEPC+Q
Sbjct: 85 ICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQ 140
>AL138781-3|CAI16879.1| 397|Homo sapiens LIM homeobox 3 protein.
Length = 397
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 404 GQEGDNPGASSKSEASEGNTKR-SVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVP 580
G E D + + + G T+ +C+ C Q I + ++ + +HS C KC CHT
Sbjct: 6 GLERDRARPGAAAVCTLGGTREIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPL 65
Query: 581 SSNIHICYGQVFCEPCF 631
+ V+C+ F
Sbjct: 66 AERCFSRGESVYCKDDF 82
>AF367089-1|AAL26314.1| 397|Homo sapiens LIM homeobox protein 3
protein.
Length = 397
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 404 GQEGDNPGASSKSEASEGNTKR-SVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVP 580
G E D + + + G T+ +C+ C Q I + ++ + +HS C KC CHT
Sbjct: 6 GLERDRARPGAAAVCTLGGTREIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPL 65
Query: 581 SSNIHICYGQVFCEPCF 631
+ V+C+ F
Sbjct: 66 AERCFSRGESVYCKDDF 82
>AF156888-1|AAF36808.1| 397|Homo sapiens LIM homeobox protein 3
isoform a protein.
Length = 397
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 404 GQEGDNPGASSKSEASEGNTKR-SVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVP 580
G E D + + + G T+ +C+ C Q I + ++ + +HS C KC CHT
Sbjct: 6 GLERDRARPGAAAVCTLGGTREIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPL 65
Query: 581 SSNIHICYGQVFCEPCF 631
+ V+C+ F
Sbjct: 66 AERCFSRGESVYCKDDF 82
>U63721-3|AAC13886.1| 633|Homo sapiens LIM-kinase protein.
Length = 633
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 452 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 622
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 3 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 59
>U63721-2|AAC13885.1| 647|Homo sapiens LIM-kinase protein.
Length = 647
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 452 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 622
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 17 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 73
>U62293-2|AAB17546.1| 633|Homo sapiens alternatively spliced
LIM-kinase1 protein.
Length = 633
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 452 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 622
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 3 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 59
>U62293-1|AAB17545.1| 647|Homo sapiens LIM-kinase1 protein.
Length = 647
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 452 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 622
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 17 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 73
>D26309-1|BAA05371.1| 647|Homo sapiens LIM kinase protein.
Length = 647
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 452 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 622
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 17 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 73
>AF134379-1|AAD25742.1| 305|Homo sapiens LIM domain kinase 1 splice
variant protein.
Length = 305
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 452 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 622
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 17 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 73
>AB209560-1|BAD92797.1| 1011|Homo sapiens polymerase (DNA directed),
delta 1, catalytic subunit 125kDa variant protein.
Length = 1011
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 632 GSKARRRL-DHSRCGCW-TMEPCGKNSTWHSDYGRPAC 525
G +A L + +RC CW T P +++TW S + P+C
Sbjct: 898 GKQAHVELAERTRCSCWSTACPLTRSTTWSSSWPSPSC 935
>AK027444-1|BAB55115.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ14538 fis, clone NT2RM2001324, weakly similar to
ZYXIN. ).
Length = 276
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 473 VCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQVFCEPCFQ 634
+C+ C + + +E K+ +H+ C C C + + + G+ CEPC+Q
Sbjct: 85 ICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQ 140
>BC103938-1|AAI03939.1| 362|Homo sapiens LIM homeobox 6 protein.
Length = 362
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 592
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 593 HICYGQVFCE 622
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>BC103937-1|AAI03938.1| 363|Homo sapiens LIM homeobox 6 protein.
Length = 363
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 592
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 593 HICYGQVFCE 622
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>BC103936-1|AAI03937.1| 348|Homo sapiens LIM homeobox 6 protein.
Length = 348
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 592
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 593 HICYGQVFCE 622
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>AL162424-5|CAO03566.1| 377|Homo sapiens LIM homeobox 6 protein.
Length = 377
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 592
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 83 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 139
Query: 593 HICYGQVFCE 622
+I ++FC+
Sbjct: 140 YIKNKEIFCK 149
>AL162424-4|CAO03565.1| 392|Homo sapiens LIM homeobox 6 protein.
Length = 392
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 592
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 83 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 139
Query: 593 HICYGQVFCE 622
+I ++FC+
Sbjct: 140 YIKNKEIFCK 149
>AL162424-3|CAI14704.1| 348|Homo sapiens LIM homeobox 6 protein.
Length = 348
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 592
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 593 HICYGQVFCE 622
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>AL162424-2|CAI14703.1| 363|Homo sapiens LIM homeobox 6 protein.
Length = 363
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 592
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 593 HICYGQVFCE 622
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>AB031042-1|BAA83423.1| 348|Homo sapiens LIM-homeodomain (LHX)
protein 6.1b protein.
Length = 348
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 592
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 593 HICYGQVFCE 622
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>AB031041-1|BAA83422.1| 363|Homo sapiens LIM-homeodomain (LHX)
protein 6.1a protein.
Length = 363
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 592
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 593 HICYGQVFCE 622
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>BC014501-1|AAH14501.1| 172|Homo sapiens FHL3 protein protein.
Length = 172
Score = 30.3 bits (65), Expect = 6.4
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 506 NNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 637
+ K+E Q +H HC C C S + G +C PC+++
Sbjct: 4 SRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 48
>U90654-1|AAB86592.1| 341|Homo sapiens zinc-finger
domain-containing protein protein.
Length = 341
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-----TVPSSNIHICYGQVFCEP 625
+ +CS C ++ + + I+ +H HC KC C + + + I Q++C
Sbjct: 269 KRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCND 328
Query: 626 CF 631
C+
Sbjct: 329 CY 330
>CR456364-1|CAG30250.1| 948|Homo sapiens Em:AC016026.2 protein.
Length = 948
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 431 SSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIH---IC 601
S K E + C C + + ++ + + FH C KC +C T + + I
Sbjct: 749 SMKKEFPQNLGGSDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIE 808
Query: 602 YGQVFCEP 625
G+ +C+P
Sbjct: 809 DGKFYCKP 816
>BX537887-1|CAD97883.1| 648|Homo sapiens hypothetical protein
protein.
Length = 648
Score = 29.9 bits (64), Expect = 8.4
Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 7/116 (6%)
Frame = +2
Query: 302 CNGCFKQHVLDRFRGECPSVHTNWAQWTCGKFGNGQEGDNPGASSKSEASEGNT-KRSVC 478
C C K R E ++HT +TC K G + +S SE K C
Sbjct: 314 CKECGKAFRQSRSLNEHKNIHTGEKPYTCEKCGKAFNQSSSLIIHRSIHSEQKLYKCEEC 373
Query: 479 SRCL---QMINENNKIEIDKQAFH-SHCAKCYF--CHTVPSSNIHICYGQVFCEPC 628
+ +N++ +I ++ + C K ++ H IH CE C
Sbjct: 374 GKAFTWSSSLNKHKRIHTGEKPYTCEECGKAFYRSSHLAKHKRIHTGEKPYTCEEC 429
>BC085009-1|AAH85009.1| 285|Homo sapiens MICAL3 protein protein.
Length = 285
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 431 SSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIH---IC 601
S K E + C C + + ++ + + FH C KC +C T + + I
Sbjct: 68 SMKKEFPQNLGGSDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIE 127
Query: 602 YGQVFCEP 625
G+ +C+P
Sbjct: 128 DGKFYCKP 135
>BC043151-1|AAH43151.1| 648|Homo sapiens zinc finger protein 595
protein.
Length = 648
Score = 29.9 bits (64), Expect = 8.4
Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 7/116 (6%)
Frame = +2
Query: 302 CNGCFKQHVLDRFRGECPSVHTNWAQWTCGKFGNGQEGDNPGASSKSEASEGNT-KRSVC 478
C C K R E ++HT +TC K G + +S SE K C
Sbjct: 314 CKECGKAFRQSRSLNEHKNIHTGEKPYTCEKCGKAFNQSSSLIIHRSIHSEQKLYKCEEC 373
Query: 479 SRCL---QMINENNKIEIDKQAFH-SHCAKCYF--CHTVPSSNIHICYGQVFCEPC 628
+ +N++ +I ++ + C K ++ H IH CE C
Sbjct: 374 GKAFTWSSSLNKHKRIHTGEKPYACEECGKAFYRSSHLAKHKRIHTGEKPYTCEEC 429
>BC036110-1|AAH36110.1| 648|Homo sapiens zinc finger protein 595
protein.
Length = 648
Score = 29.9 bits (64), Expect = 8.4
Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 7/116 (6%)
Frame = +2
Query: 302 CNGCFKQHVLDRFRGECPSVHTNWAQWTCGKFGNGQEGDNPGASSKSEASEGNT-KRSVC 478
C C K R E ++HT +TC K G + +S SE K C
Sbjct: 314 CKECGKAFRQSRSLNEHKNIHTGEKPYTCEKCGKAFNQSSSLIIHRSIHSEQKLYKCEEC 373
Query: 479 SRCL---QMINENNKIEIDKQAFH-SHCAKCYF--CHTVPSSNIHICYGQVFCEPC 628
+ +N++ +I ++ + C K ++ H IH CE C
Sbjct: 374 GKAFTWSSSLNKHKRIHTGEKPYACEECGKAFYRSSHLAKHKRIHTGEKPYTCEEC 429
>AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-----TVPSSNIHICYGQVFCEP 625
+ +CS C ++ + + I+ +H HC KC C + + + I Q++C
Sbjct: 1277 KRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCND 1336
Query: 626 CF 631
C+
Sbjct: 1337 CY 1338
>AL138781-2|CAI16878.1| 402|Homo sapiens LIM homeobox 3 protein.
Length = 402
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 473 VCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCEPCF 631
+C+ C Q I + ++ + +HS C KC CHT + V+C+ F
Sbjct: 35 LCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDF 87
>AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-----TVPSSNIHICYGQVFCEP 625
+ +CS C ++ + + I+ +H HC KC C + + + I Q++C
Sbjct: 1277 KRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCND 1336
Query: 626 CF 631
C+
Sbjct: 1337 CY 1338
>AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-----TVPSSNIHICYGQVFCEP 625
+ +CS C ++ + + I+ +H HC KC C + + + I Q++C
Sbjct: 1277 KRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCND 1336
Query: 626 CF 631
C+
Sbjct: 1337 CY 1338
>AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-----TVPSSNIHICYGQVFCEP 625
+ +CS C ++ + + I+ +H HC KC C + + + I Q++C
Sbjct: 1277 KRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCND 1336
Query: 626 CF 631
C+
Sbjct: 1337 CY 1338
>AK126902-1|BAC86743.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ44954 fis, clone BRAWH2010364. ).
Length = 247
Score = 29.9 bits (64), Expect = 8.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 545 HCAKCYFCHTVPSSNIHICYGQVFCEPCFQHHV 643
HC+ C F H P ++ G + C PC H+
Sbjct: 157 HCSPCCFLHRSPCCSLQ---GSLHCSPCCSLHI 186
>AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein.
Length = 1349
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-----TVPSSNIHICYGQVFCEP 625
+ +CS C ++ + + I+ +H HC KC C + + + I Q++C
Sbjct: 1277 KRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCND 1336
Query: 626 CF 631
C+
Sbjct: 1337 CY 1338
>AF156889-1|AAF36809.1| 402|Homo sapiens LIM homeobox protein 3
isoform b protein.
Length = 402
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 473 VCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCEPCF 631
+C+ C Q I + ++ + +HS C KC CHT + V+C+ F
Sbjct: 35 LCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDF 87
>AF144237-1|AAD33924.1| 797|Homo sapiens LOMP protein protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-----TVPSSNIHICYGQVFCEP 625
+ +CS C ++ + + I+ +H HC KC C + + + I Q++C
Sbjct: 725 KRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCND 784
Query: 626 CF 631
C+
Sbjct: 785 CY 786
>AF092557-2|AAC96299.1| 120|Homo sapiens LIM domain only 7 protein.
Length = 120
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +2
Query: 467 RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-----TVPSSNIHICYGQVFCEP 625
+ +CS C ++ + + I+ +H HC KC C + + + I Q++C
Sbjct: 48 KRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCND 107
Query: 626 CF 631
C+
Sbjct: 108 CY 109
>AB037785-1|BAA92602.1| 811|Homo sapiens KIAA1364 protein protein.
Length = 811
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 431 SSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIH---IC 601
S K E + C C + + ++ + + FH C KC +C T + + I
Sbjct: 612 SMKKEFPQNLGGSDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIE 671
Query: 602 YGQVFCEP 625
G+ +C+P
Sbjct: 672 DGKFYCKP 679
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,244,468
Number of Sequences: 237096
Number of extensions: 2032623
Number of successful extensions: 5386
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 5030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5386
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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