Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17m07
(631 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0737 - 31328473-31330513,31331015-31331184 144 7e-35
08_01_0471 - 4147170-4149207,4150535-4150692 135 2e-32
04_04_1339 + 32760424-32760584,32762428-32764462 135 3e-32
04_04_1337 + 32737051-32737202,32737314-32737809 76 3e-14
03_06_0221 + 32458867-32459149,32460271-32460386,32460461-324608... 61 6e-10
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152... 47 1e-05
01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297... 46 2e-05
05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277... 46 3e-05
05_02_0021 - 5674587-5674799,5674898-5675031,5675129-5675207,567... 41 7e-04
12_01_0812 - 7460448-7460507,7460595-7460672,7460772-7460981,746... 36 0.020
01_07_0093 + 41045841-41045968,41046068-41046161,41046740-410469... 31 0.75
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 2.3
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504... 29 2.3
03_06_0060 + 31341233-31342009,31342752-31342871,31343401-313435... 29 4.0
01_06_0272 - 28065896-28065991,28066069-28066227,28066918-280669... 29 4.0
04_04_0659 + 27008867-27008963,27011209-27011280,27011833-270119... 28 7.0
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552... 28 7.0
>02_05_0737 - 31328473-31330513,31331015-31331184
Length = 736
Score = 144 bits (348), Expect = 7e-35
Identities = 70/147 (47%), Positives = 97/147 (65%)
Frame = +2
Query: 188 MDEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQH 367
+D KY ER W +L++AI EI N SGLSFEELYR+AY MVLHK+GE+LY GL+ +T
Sbjct: 23 LDPKYAERTWKVLEHAIHEIYNHNASGLSFEELYRSAYNMVLHKYGEKLYDGLERTMTWR 82
Query: 368 LETKVREDVLHSLHNGFLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGL 547
L+ ++ + + + FL+ LN W DH ++ MIRDILMYMDR +V Q+ V+ LGL
Sbjct: 83 LK-EISKSIEAAQGGLFLEELNAKWMDHNKALQMIRDILMYMDRTYVPQSRRTPVHELGL 141
Query: 548 IIFRDQVVRYGCIXDHLRQTLLELVAR 628
++RD ++ I L TLL+L+ R
Sbjct: 142 NLWRDHIIHSPMIHSRLLDTLLDLIHR 168
>08_01_0471 - 4147170-4149207,4150535-4150692
Length = 731
Score = 135 bits (327), Expect = 2e-32
Identities = 69/146 (47%), Positives = 93/146 (63%)
Frame = +2
Query: 191 DEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQHL 370
D ++ E+ W L +AI+EI N SGLSFEELYR AY +VLHKHG +LY L E + HL
Sbjct: 20 DPRFFEKAWRKLDDAIREIYNHNASGLSFEELYRTAYNLVLHKHGPKLYDKLTENMEDHL 79
Query: 371 ETKVREDVLHSLHNGFLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLI 550
+ ++R + + FL L W DH ++ MIRDILMYMDRVF+ N+ V++LGL
Sbjct: 80 Q-EMRVSIEAAQGGLFLVELQRKWDDHNKALQMIRDILMYMDRVFIPTNKKTPVFDLGLD 138
Query: 551 IFRDQVVRYGCIXDHLRQTLLELVAR 628
++RD +VR I L TLL+L+ R
Sbjct: 139 LWRDTIVRSPKIHGRLLDTLLDLIHR 164
>04_04_1339 + 32760424-32760584,32762428-32764462
Length = 731
Score = 135 bits (326), Expect = 3e-32
Identities = 74/148 (50%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Frame = +2
Query: 191 DEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQHL 370
D K ++ W L++AI+EI N SGLSFEELYR AY +VLHKHG +LY L E + HL
Sbjct: 21 DPKSFDKSWKKLEDAIREIYNHNASGLSFEELYRTAYNLVLHKHGLKLYDKLTENLKGHL 80
Query: 371 ETKVR--EDVLHSLHNGFLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLG 544
+ R ED SL FL+ L W DH ++ MIRDILMYMDR F+ N+ V++LG
Sbjct: 81 KEMCRSIEDAQGSL---FLEELQRRWADHNKALQMIRDILMYMDRTFIATNKKTPVFDLG 137
Query: 545 LIIFRDQVVRYGCIXDHLRQTLLELVAR 628
L ++RD VVR I L TLLEL+ R
Sbjct: 138 LELWRDIVVRTPKIHGRLLDTLLELIHR 165
>04_04_1337 + 32737051-32737202,32737314-32737809
Length = 215
Score = 75.8 bits (178), Expect = 3e-14
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Frame = +2
Query: 188 MDEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQH 367
MD + +AI++I ++ L+FE+LYR Y +VL+KHGE +Y+ + +T
Sbjct: 17 MDAALAASSCQAVTDAIRDIYAQDMEKLNFEQLYRRVYEVVLNKHGELMYSEVATALTAE 76
Query: 368 LETKVREDVLHSLHNG-----FLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNV 532
+E +R ++ G FL+ L + W H ++ +RD++MYM+R F+ +V
Sbjct: 77 VE-GLRTSLVAVADGGGGGGAFLRELLSKWRRHTEAVAAVRDMVMYMERTFIVTYRKVSV 135
Query: 533 YNLGLIIFRDQVVRYGCIXDHL 598
LG+ ++RD VV G + L
Sbjct: 136 QELGVKLWRDGVVCSGDVMPRL 157
>03_06_0221 +
32458867-32459149,32460271-32460386,32460461-32460807,
32461231-32461411,32461507-32461629,32461828-32462115,
32462536-32462688,32463068-32463169,32463260-32463313,
32463518-32463624,32463867-32463927,32464019-32464150,
32464245-32464382,32464459-32464539,32464635-32464715,
32465133-32465213,32465300-32465413
Length = 813
Score = 61.3 bits (142), Expect = 6e-10
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +2
Query: 200 YVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQHLETK 379
+ E W++LK+AI I K E+LY+ A + LHK G LY +K+ H+ K
Sbjct: 103 FEEDTWAILKDAITAIFLKQKLSCDVEKLYQAAGDLCLHKLGANLYERIKKECEVHISAK 162
Query: 380 VREDVLHSLH-NGFLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQ-NEVDNVYNLGLII 553
+ V S FL + W D M++IR I + +D +V+ + +V+++GL +
Sbjct: 163 ISALVGQSPDLVVFLSLVQRTWQDFCDQMLIIRGIALLLDVKYVKNVANICSVWDMGLKL 222
Query: 554 FR 559
FR
Sbjct: 223 FR 224
>01_04_0017 -
15113479-15113580,15113950-15114117,15115011-15115229,
15115303-15115446,15115558-15115840,15115936-15115991,
15116067-15116216,15116299-15116385,15116463-15116498,
15116746-15116808,15116887-15116967,15117053-15117142,
15117349-15117426,15117510-15117731,15117788-15117835,
15117948-15118133,15120910-15121009,15121107-15121246
Length = 750
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Frame = +2
Query: 197 KYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVL----HKHGERLYTGLKEVVTQ 364
+++++ + LKN ++ + S + LY Y M H + ++LY +E +
Sbjct: 16 EFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYEKYRESFEE 75
Query: 365 HLETKVREDVLHSLHNGF-LQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNL 541
++ + V L H+ F L+ L W++H+ + + Y+DR F+ + + + +
Sbjct: 76 YITSMVLPS-LREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFISRRSLPQLSEV 134
Query: 542 GLIIFRDQV 568
GL FRD V
Sbjct: 135 GLSCFRDLV 143
>01_04_0018 +
15128174-15128316,15128445-15128544,15129573-15129758,
15129877-15129924,15130006-15130209,15130476-15130565,
15130667-15130747,15130827-15130889,15131794-15131832,
15131914-15132000,15132103-15132252,15132331-15132386,
15132493-15132775,15132989-15133132,15133233-15133451,
15133528-15133695,15133868-15133969
Length = 720
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = +2
Query: 275 FEELYRNAYTMVLHK----HGERLYTGLKEVVTQHLETKVREDVLHSLHNGFL-QTLNNA 439
+ LY Y M K + + LY K+ + H+E+ V L+ H FL + +
Sbjct: 43 YMHLYTTVYNMCTQKPPNDYSQVLYDRYKQALDDHIESVVLPS-LNEKHGVFLLREIVQR 101
Query: 440 WTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQV 568
W H+ + +R Y+DR +V + +D++ +LG FRD V
Sbjct: 102 WEKHKLMVRWLRRFFDYLDRYYVTRRSLDSLKDLGWSSFRDLV 144
>05_01_0355 -
2774217-2774318,2774608-2774775,2774872-2775090,
2775176-2775319,2775485-2775767,2775874-2775929,
2776012-2776161,2776254-2776340,2776414-2776449,
2777100-2777162,2777247-2777327,2777407-2777496,
2777690-2777767,2777855-2778058,2778139-2778186,
2778262-2778447,2779879-2779978,2780121-2780260
Length = 744
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Frame = +2
Query: 224 LKNAIQEIQKKNNSGLSFEELYRNAYTMVL----HKHGERLYTGLKEVVTQHLETKVRED 391
LKN ++ + S + LY Y M H + ++LY +E +++ + V
Sbjct: 25 LKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPS 84
Query: 392 VLHSLHNGF-LQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQV 568
L H+ F L+ L W++H+ + + Y+DR F+ + + + +GL FRD +
Sbjct: 85 -LRDKHDEFMLRELVKRWSNHKIMVRWLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLI 143
>05_02_0021 -
5674587-5674799,5674898-5675031,5675129-5675207,
5675737-5675799,5676420-5676482,5676557-5676673,
5676756-5676803,5676918-5677103,5677948-5678047,
5678323-5678562,5678583-5678686
Length = 448
Score = 41.1 bits (92), Expect = 7e-04
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Frame = +2
Query: 266 GLSFEELYRNAYTMVL-------HK-HGERLYTGLKEVVTQHLETKVREDVLHSLHNGFL 421
G S +E Y + YT+V HK + + LY K+ + HL++ V + N L
Sbjct: 104 GFSPDE-YMHIYTLVYYMCTQKGHKDYPKELYHLCKQALDDHLDSIVLPSLNEKHGNFLL 162
Query: 422 QTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQV 568
+ +W H+ + +R Y+DRV + + ++ ++G I FRD V
Sbjct: 163 AEMLQSWEKHKLMVRWLRRFFDYLDRVSITWKSLHSLEHMGWIGFRDMV 211
>12_01_0812 -
7460448-7460507,7460595-7460672,7460772-7460981,
7461095-7461142,7461270-7461455,7461653-7461656,
7461766-7461893
Length = 237
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +2
Query: 419 LQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQVVRYGCIXDHL 598
L+ L + W +H+ ++ Y+DR ++ + + + L L FRDQV Y + D +
Sbjct: 58 LKGLVDRWRNHKKIVISETRFFFYLDRYYILRKSLVPLEQLNLCSFRDQV--YSELKDKI 115
Query: 599 RQTLLELV 622
+T+++++
Sbjct: 116 TRTVVDMI 123
>01_07_0093 +
41045841-41045968,41046068-41046161,41046740-41046925,
41047035-41047082,41047158-41047343,41047430-41047516,
41048059-41048145,41048231-41048317
Length = 300
Score = 31.1 bits (67), Expect = 0.75
Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 287 YRNAYTMVLHK--HGERLYTGLKEVVTQHLETKVREDVLHSLHNGFLQTLNNAWTDHQTS 460
Y AY M + K + + +Y K + V ++H + F + L W+++
Sbjct: 42 YDCAYRMAVQKDQYCQEMYNSYKATHESCVCAMVLPHLMHKQGDLFWRELVKMWSNYCAM 101
Query: 461 MVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQVVRYGCIXDHLRQTLLELV 622
+ L Y+DR FV ++ ++ + F V Y + + LL L+
Sbjct: 102 IRFTTGFLAYLDRCFVTHKKLPSLEDAAATSFFSPVFSY--FNNEISDVLLTLI 153
>11_06_0458 +
23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/66 (34%), Positives = 27/66 (40%)
Frame = -2
Query: 450 WSVHALLRVCKKPLCNECNTSSRTLVSRC*VTTSLRPVYSLSPCLCSTIVYALR*SSSND 271
WS A + L N C SR VTT + V C +VY LR S +D
Sbjct: 327 WSAQAWKTIRYSLLENNCG-------SRILVTTRIGTVAKSCSSPCLNLVYELRVLSEDD 379
Query: 270 SPELFF 253
S LFF
Sbjct: 380 SKRLFF 385
>06_03_0921 + 25949453-25949986,25950150-25950188,25950380-25950445,
25950526-25950669,25951416-25951612,25952281-25952443,
25952760-25952873,25953304-25953401,25953964-25954042,
25954356-25954514,25954690-25954779,25955790-25955923,
25956513-25956672,25956826-25956909,25957000-25957167,
25957321-25957446,25958088-25958225,25958311-25958414,
25958832-25958895,25959229-25959317,25959393-25959534,
25959937-25960000,25960085-25960152,25960399-25960521,
25960604-25960669,25960857-25960962,25961076-25961167,
25961243-25961344
Length = 1170
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +2
Query: 239 QEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQHLETKVREDVLHSLHNGF 418
+ +++ N ++ +L RN + +H + L T LKE+V H + + ED+ L
Sbjct: 834 ERVEQSVNRMMTIIDLARN----IRERHNKALKTPLKEMVIVHPDNEFLEDITGKLKEYV 889
Query: 419 LQTLN 433
++ +N
Sbjct: 890 MEEMN 894
>03_06_0060 +
31341233-31342009,31342752-31342871,31343401-31343517,
31343615-31343704,31344279-31344386,31345124-31345306
Length = 464
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 255 KTTLDYHLKSFTVMHIQWYCTNMEKDYTLASRK 353
K ++ L+ H+QW C N + D LA++K
Sbjct: 223 KVDCEHLLRILCNRHLQWRCVNAQADAALAAQK 255
>01_06_0272 -
28065896-28065991,28066069-28066227,28066918-28066966,
28067350-28067474,28067834-28068004,28068222-28068571,
28069322-28069478
Length = 368
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +2
Query: 206 ERIWSLLKNAIQEIQKKNNSGLSFEELYR---NAYTMVLHKHGERLYTGLKEV-VTQ-HL 370
E+ +S + + +++++ K+ EE Y N++ L H E L ++ V+Q HL
Sbjct: 242 EKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSFQFQLTSHQEERDAILAKIEVSQVHL 301
Query: 371 E----TKVREDVLHSLHNGFLQTLNN 436
E T V D + H+G + T+NN
Sbjct: 302 ELLKQTNVLNDAFYISHDGVIGTINN 327
>04_04_0659 +
27008867-27008963,27011209-27011280,27011833-27011907,
27012071-27012181,27012609-27012713,27012997-27013049,
27013549-27013674,27013742-27013861
Length = 252
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 452 QTSMVMIRDILMYMDRVFVQQNEVDNVYNLGL 547
Q S + ++ RV +Q NEV VYNLG+
Sbjct: 218 QMSYTNLMQHIILSPRVSLQANEVSEVYNLGI 249
>01_05_0801 +
25353708-25353914,25354307-25354429,25355035-25355205,
25355303-25355392,25355497-25355583,25355664-25355719,
25355812-25355905,25356032-25356144,25356211-25356283,
25356603-25356683,25356865-25356951,25357031-25357135,
25357279-25357385,25357481-25357541,25357931-25358158,
25359720-25360677,25360816-25360997,25361237-25361326,
25361422-25361709,25361844-25362056,25362560-25362784
Length = 1212
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 282 SSNDSPELFFFCISCMAFFNKLHIRSTY 199
S P + F C+ C+ FFN H+ +TY
Sbjct: 508 SQQTCPVICFACLMCLRFFNS-HLLATY 534
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,685,854
Number of Sequences: 37544
Number of extensions: 325578
Number of successful extensions: 849
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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