Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17m04
(571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ424900-1|ABD83665.1| 232|Homo sapiens chromosome 19 open read... 31 2.2
BC014609-1|AAH14609.1| 214|Homo sapiens chromosome 19 open read... 31 2.2
AY753639-1|AAX09280.1| 214|Homo sapiens c113 sperm protein prot... 31 2.2
X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 su... 31 3.8
U79668-1|AAB49678.1| 916|Homo sapiens alpha1A-voltage-dependent... 31 3.8
U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent... 31 3.8
U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent... 31 3.8
U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive... 31 3.8
U79664-1|AAB49675.1| 949|Homo sapiens alpha1A-voltage-dependent... 31 3.8
U79663-1|AAB49674.1| 949|Homo sapiens alpha1A-voltage-dependent... 31 3.8
AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q t... 31 3.8
AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-depende... 31 3.8
AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-depende... 31 3.8
BC010443-1|AAH10443.1| 163|Homo sapiens C19orf36 protein protein. 29 8.7
AY358444-1|AAQ88809.1| 157|Homo sapiens ALLL831 protein. 29 8.7
>DQ424900-1|ABD83665.1| 232|Homo sapiens chromosome 19 open reading
frame 36 variant 1 protein.
Length = 232
Score = 31.5 bits (68), Expect = 2.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 315 TMLICMTCFTALVAAGCIAC 374
T+L+C+ C TA +A GC+ C
Sbjct: 2 TLLLCLVCLTAALAHGCLHC 21
>BC014609-1|AAH14609.1| 214|Homo sapiens chromosome 19 open reading
frame 36 protein.
Length = 214
Score = 31.5 bits (68), Expect = 2.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 315 TMLICMTCFTALVAAGCIAC 374
T+L+C+ C TA +A GC+ C
Sbjct: 2 TLLLCLVCLTAALAHGCLHC 21
>AY753639-1|AAX09280.1| 214|Homo sapiens c113 sperm protein
protein.
Length = 214
Score = 31.5 bits (68), Expect = 2.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 315 TMLICMTCFTALVAAGCIAC 374
T+L+C+ C TA +A GC+ C
Sbjct: 2 TLLLCLVCLTAALAHGCLHC 21
>X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 subunit
protein.
Length = 2262
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 1627 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 1686
Query: 290 LQCIK 304
+Q K
Sbjct: 1687 VQSFK 1691
>U79668-1|AAB49678.1| 916|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 916
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 314 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 373
Query: 290 LQCIK 304
+Q K
Sbjct: 374 VQSFK 378
>U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 1182
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 314 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 373
Query: 290 LQCIK 304
+Q K
Sbjct: 374 VQSFK 378
>U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2505
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 1626 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 1685
Query: 290 LQCIK 304
+Q K
Sbjct: 1686 VQSFK 1690
>U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive
calcium channel protein.
Length = 1194
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 314 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 373
Query: 290 LQCIK 304
+Q K
Sbjct: 374 VQSFK 378
>U79664-1|AAB49675.1| 949|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 949
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 314 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 373
Query: 290 LQCIK 304
+Q K
Sbjct: 374 VQSFK 378
>U79663-1|AAB49674.1| 949|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 949
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 314 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 373
Query: 290 LQCIK 304
+Q K
Sbjct: 374 VQSFK 378
>AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q type
calcium channel alpha 1A subunit protein.
Length = 980
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 112 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 171
Query: 290 LQCIK 304
+Q K
Sbjct: 172 VQSFK 176
>AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2506
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 1625 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 1684
Query: 290 LQCIK 304
+Q K
Sbjct: 1685 VQSFK 1689
>AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2472
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 YRLVWNIFDFRFIPIGIS-LLIEQFRRKMICLSLYALIASATLLACVPVCYK-RFEMQKF 289
+R WNIFDF + I+ +L+ +F I LS L +A L+ + Y R + F
Sbjct: 1626 FRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF 1685
Query: 290 LQCIK 304
+Q K
Sbjct: 1686 VQSFK 1690
>BC010443-1|AAH10443.1| 163|Homo sapiens C19orf36 protein protein.
Length = 163
Score = 29.5 bits (63), Expect = 8.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 318 MLICMTCFTALVAAGCIAC 374
+L+C+ C TA +A GC+ C
Sbjct: 8 LLLCLVCLTAALAHGCLHC 26
>AY358444-1|AAQ88809.1| 157|Homo sapiens ALLL831 protein.
Length = 157
Score = 29.5 bits (63), Expect = 8.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 318 MLICMTCFTALVAAGCIAC 374
+L+C+ C TA +A GC+ C
Sbjct: 3 LLLCLVCLTAALAHGCLHC 21
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,821,160
Number of Sequences: 237096
Number of extensions: 1486682
Number of successful extensions: 3155
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3155
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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