Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17l24
(637 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 29 0.56
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 28 0.98
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 28 1.3
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 28 1.3
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 1.7
SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|... 27 1.7
SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr ... 27 3.0
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 4.0
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 4.0
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 26 4.0
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 26 5.2
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 25 6.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 9.1
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 25 9.1
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 25 9.1
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 29.1 bits (62), Expect = 0.56
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +1
Query: 349 FINNTKPDIIEQFSKMMTDEEKS--KIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDS 522
FI+N +P + K + K+ K+ + VK +R REK K S
Sbjct: 785 FISNVRPKLFAYPPKSVQPTAKTVQKVETAVLSTTVKAQARAKRAE------REKASKGS 838
Query: 523 NEDEDKVE--SVDETYENPYIVDKSQLEEI 606
N+DE K++ + +E P +D+ + ++I
Sbjct: 839 NDDEMKIDKKTTEEKEATPMEMDEEKSQDI 868
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 28.3 bits (60), Expect = 0.98
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +1
Query: 379 EQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD- 555
E+ T+++ + DV KE E V D EK DS E DKVE D
Sbjct: 473 EKTDSKETEDKVEETESKEADVKAKETDSIE-----VDDKEEK--TDSKETADKVEQTDS 525
Query: 556 -ETYENPYIVDKSQLEEIEKETGTIDVK 636
+T E P D + E ++ + DVK
Sbjct: 526 KDTNEKPAKDDNKEANEKAEKVDSKDVK 553
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 451 KENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIE-KET 618
KE++ + L KD+ EK K +NED K E+ + E I + E+ + KET
Sbjct: 424 KESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKET 480
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 27.9 bits (59), Expect = 1.3
Identities = 26/91 (28%), Positives = 39/91 (42%)
Frame = +1
Query: 355 NNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDE 534
N KPD+I K D S+ KL+ A E Q L+KD ++NE
Sbjct: 917 NGAKPDVIGASGKKPIDLSSSEPIKLVFKEANNE-QAQSISRSLIKDSEGSI--NTNETL 973
Query: 535 DKVESVDETYENPYIVDKSQLEEIEKETGTI 627
+ V+E E+ + KS E + +T T+
Sbjct: 974 ESTSIVNEIEESA-VQTKSYSESMWNKTVTM 1003
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 229 LKHQLMNSFWCKQVDGNTKRNSLYTFLA 146
L+H + NSF +DG+T N FLA
Sbjct: 246 LRHAINNSFNSISIDGDTSTNDTIAFLA 273
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 502 EKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIEKETGT 624
E F K ++ +K +S+ ETYE K +LEE+ E T
Sbjct: 51 EAFRKTVDDMYEKQKSIRETYEKDINKLKRELEELGVEANT 91
>SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 514 KDSNEDE--DKVESVDETYENPYIVDKSQLEEIEK 612
K SNE + V+ + EN YIVDK ++ E++K
Sbjct: 24 KHSNEKKYLKSVKGKNNENENSYIVDKKRMNELKK 58
>SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 339
Score = 26.6 bits (56), Expect = 3.0
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +3
Query: 195 LHQNEFISWCFKFIKPTTKPN*KIAKIFFPTPLN 296
LH+ +F C+++++ N A++FF L+
Sbjct: 72 LHEQDFYDLCYQYLRKAASQNVVYAEMFFDPQLH 105
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 4.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 526 EDEDKVESVDETYENPYIVDKSQLEEIEKETGTID 630
+++ K + D+ E + DK+Q++EIEK +D
Sbjct: 272 KEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKEVD 306
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 26.2 bits (55), Expect = 4.0
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +1
Query: 403 DEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIV 582
D K+ ++K H A E Q G ++ E+ D +EDED+ E D N +++
Sbjct: 178 DTSKNGLSKKQHSEAQPEVQ------GNDDEVEEEDDDDDDEDEDEDEDEDNNNNNRWLL 231
Query: 583 DKSQLEEIEKETGTIDVK 636
+ +I + +K
Sbjct: 232 IEQYPSDIVAYENFVSLK 249
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 26.2 bits (55), Expect = 4.0
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -1
Query: 601 LQVVIYQLCMDFHTFRQRIRL 539
L ++++++CM F T +RIR+
Sbjct: 849 LGIILFEMCMTFSTSMERIRI 869
>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 611
Score = 25.8 bits (54), Expect = 5.2
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 418 KIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETY 564
K+ LLH++ VK+ LPE L+K + + E+K +S+ T+
Sbjct: 420 KLRLLLHELLVKKKALPELDKDLLKFVWVVDFPLFSPTEEKNQSITSTH 468
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 6.9
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 355 NNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNED 531
N P I+ +K + KS + D + + P C G K + +KFG D + +
Sbjct: 320 NYHNPSILLIKAKKINANHKSSSRPISLDATIPR-KYPPHCIGTDKAVPQKFGADFHNE 377
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 370 DIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPE 471
D+IE+F K+ + E+ ++ L+ +K L E
Sbjct: 1264 DLIEKFEKLSSSEKNDNLSNLIERQIIKYRSLFE 1297
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 25.0 bits (52), Expect = 9.1
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 448 VKENQLPERCSGLVKDIREKFGKD-SNEDEDKVESVDETYENPYIVDKSQLEEIEKETGT 624
++E L ++ + +++ +E+ D S+E E+ S DE+ +N D+S +EK T
Sbjct: 518 IREPSLTKKTAVSMQESKEEGRSDESSESEESGSSSDES-DNSEKEDRSNPIPVEKRAST 576
Query: 625 I 627
+
Sbjct: 577 V 577
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = +1
Query: 484 LVKDIREKFGKDSNED------EDKVESVDETYENPYIVDKSQ 594
L++ REKFGKD ++ K +D T E P+ V +++
Sbjct: 33 LIEWFREKFGKDISQPSVSQILSSKYSYLDNTVEKPWDVKRNR 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,708,218
Number of Sequences: 5004
Number of extensions: 59834
Number of successful extensions: 211
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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