Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17l14
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 33 0.049
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 30 0.26
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 30 0.34
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 29 0.60
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 27 2.4
SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc... 27 3.2
SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces pombe... 26 5.6
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 25 7.4
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 25 9.8
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 32.7 bits (71), Expect = 0.049
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 511 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLD 663
F+ D DG+ + EE + + G L++ E ++ + DTD G I+ +
Sbjct: 91 FKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYE 141
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 30.3 bits (65), Expect = 0.26
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 496 GLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSG 648
G+ ++FR + S +LN+ EF + GL + E LF + G
Sbjct: 488 GITKVFRHFEKKKSNMLNEVEFYAALASLGLVYDTEEGTALFHRAANSEEG 538
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 29.9 bits (64), Expect = 0.34
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 394 EELMQKSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGI 573
E + ++ + + +++ L + AS L R+F +D+DG ++ +EF+ +
Sbjct: 24 ERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLA-SRLFSVVDEDGGGDVDFQEFINSL 82
Query: 574 KETGLELNKSEAEEL-FSQFDTDSSGSIS 657
+ NK E + F +D D G IS
Sbjct: 83 SVFSVHGNKEEKLKFAFKIYDIDRDGYIS 111
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 29.1 bits (62), Expect = 0.60
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 505 RIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSIS 657
R F DDD + ++ KE ++ E E + +FD D G I+
Sbjct: 114 RAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEIN 164
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/55 (20%), Positives = 22/55 (40%)
Frame = +1
Query: 499 LGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLD 663
+ F+ D D ++ E ++ G KSE ++ FD G + ++
Sbjct: 39 INEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 331 KPKTSSNIAWHRPMSAGSVQEEELMQK 411
KPK S ++W+ + GS +E EL+ K
Sbjct: 56 KPKKDSLLSWNILLKKGSYKENELLAK 82
>SPCC622.12c |||NADP-specific glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 291 GCNVILNSKNVFRKTE--NIFQHCVAQTDVCWFRPGGRADA 407
GC + N+ E +F+ A + CW PG A+A
Sbjct: 331 GCRYVAEGSNMGSSAEAVEVFEKSRASGEGCWLAPGKAANA 371
>SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 746
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 568 HKGIL-LCSVVYFHHHPCDGKFFQVPRSLKHLGT 470
H+G++ +C++VY KF + P++++ L T
Sbjct: 686 HRGLVCICNIVYSKDQEIFNKFIKTPKAVETLRT 719
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 317 KCI*ENRKHLPTLRGTDRCLLVPSRRK 397
+C+ E+R+H P L +D LL +RK
Sbjct: 82 RCMEEDREHNPFLSSSDNQLLSRKKRK 108
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 508 IFRRMDDDGSKLLNKEEFLYGIKETGL-ELNKSEAE 612
IFRR+ D S + ++ FL+ G+ E+ +EAE
Sbjct: 377 IFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAE 412
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,424,716
Number of Sequences: 5004
Number of extensions: 45963
Number of successful extensions: 126
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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