Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17l09
         (649 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42360-1|AAB18376.1|  347|Homo sapiens N33 protein form 2 protein.     31   3.5  
BC010370-1|AAH10370.1|  347|Homo sapiens tumor suppressor candid...    31   3.5  
U42359-1|AAB18375.1|  348|Homo sapiens N33 protein form 1 protein.     31   4.7  
U42349-1|AAB18374.1|  348|Homo sapiens N33 protein.                    31   4.7  
BT020002-1|AAV38805.1|  348|Homo sapiens Putative prostate cance...    31   4.7  
AY562999-1|AAS75589.1|   46|Homo sapiens tumor suppressor candid...    31   4.7  
AY562998-1|AAS75588.1|   49|Homo sapiens tumor suppressor candid...    31   4.7  

>U42360-1|AAB18376.1|  347|Homo sapiens N33 protein form 2 protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -1

Query: 289 SKGEVGYRVVLQLVGYALSI*FFFQFTLDV-ATILHSLIITFHIK 158
           SKG+VG R ++ LVG  L + FFF F L +  +  H    +F IK
Sbjct: 304 SKGDVGKRRIICLVGLGLVV-FFFSFLLSIFRSKYHGYPYSFLIK 347


>BC010370-1|AAH10370.1|  347|Homo sapiens tumor suppressor candidate
           3 protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -1

Query: 289 SKGEVGYRVVLQLVGYALSI*FFFQFTLDV-ATILHSLIITFHIK 158
           SKG+VG R ++ LVG  L + FFF F L +  +  H    +F IK
Sbjct: 304 SKGDVGKRRIICLVGLGLVV-FFFSFLLSIFRSKYHGYPYSFLIK 347


>U42359-1|AAB18375.1|  348|Homo sapiens N33 protein form 1 protein.
          Length = 348

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -1

Query: 289 SKGEVGYRVVLQLVGYALSI*FFFQFTLDV 200
           SKG+VG R ++ LVG  L + FFF F L +
Sbjct: 304 SKGDVGKRRIICLVGLGLVV-FFFSFLLSI 332


>U42349-1|AAB18374.1|  348|Homo sapiens N33 protein.
          Length = 348

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -1

Query: 289 SKGEVGYRVVLQLVGYALSI*FFFQFTLDV 200
           SKG+VG R ++ LVG  L + FFF F L +
Sbjct: 304 SKGDVGKRRIICLVGLGLVV-FFFSFLLSI 332


>BT020002-1|AAV38805.1|  348|Homo sapiens Putative prostate cancer
           tumor suppressor protein.
          Length = 348

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -1

Query: 289 SKGEVGYRVVLQLVGYALSI*FFFQFTLDV 200
           SKG+VG R ++ LVG  L + FFF F L +
Sbjct: 304 SKGDVGKRRIICLVGLGLVV-FFFSFLLSI 332


>AY562999-1|AAS75589.1|   46|Homo sapiens tumor suppressor candidate
           3 isoform b protein.
          Length = 46

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -1

Query: 289 SKGEVGYRVVLQLVGYALSI*FFFQFTLDV 200
           SKG+VG R ++ LVG  L + FFF F L +
Sbjct: 5   SKGDVGKRRIICLVGLGLVV-FFFSFLLSI 33


>AY562998-1|AAS75588.1|   49|Homo sapiens tumor suppressor candidate
           3 isoform a protein.
          Length = 49

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -1

Query: 289 SKGEVGYRVVLQLVGYALSI*FFFQFTLDV 200
           SKG+VG R ++ LVG  L + FFF F L +
Sbjct: 5   SKGDVGKRRIICLVGLGLVV-FFFSFLLSI 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,510,190
Number of Sequences: 237096
Number of extensions: 1493629
Number of successful extensions: 2843
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2843
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)