Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17l08
         (532 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   1.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   5.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.9  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/64 (18%), Positives = 28/64 (43%)
 Frame = -2

Query: 363 GSEVNYSCPQSYSPTLNYPDKVFLSAVAPRVLRWRFSLRVHLRLCNSSTRLQSPRHSQLH 184
           G    Y+         +Y +KV+   +       + ++ +H++  + S+ + SPR S + 
Sbjct: 238 GKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSDSSVVGSPRDSPIE 297

Query: 183 YPLE 172
             +E
Sbjct: 298 PEIE 301



 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 61  TIGVLSTFSTLE**QPVKIIICT 129
           T+ V +  ST+E   PVK ++C+
Sbjct: 15  TMSVKNEISTVEPVDPVKSLVCS 37


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -2

Query: 132 HCTDYNLHRLLLFES*KCRQNTDCCNDTSTKFNR-TDSANVQRAT 1
           +C D NL +L LF +   +QN +   D   + ++ ++++ +QRA+
Sbjct: 594 NCLDPNLPKLALFATKDIKQNEEITFDYMCQSSKNSENSIMQRAS 638


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +3

Query: 192 ESGEDSEDEWNYYKGEGEREEKNASEEPEEQPRS 293
           E+ +  +DE +    + ++E  N+S   +E+P S
Sbjct: 84  ETDDKDDDESDNENIKSQKEFPNSSSSDDERPNS 117


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
 Frame = +3

Query: 222 NYY-KGEGEREEKNASEEPEEQPRSET 299
           NY  +GE      NAS  P EQ  S T
Sbjct: 729 NYIMRGEASPRSPNASPSPAEQCASTT 755


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 400 LTCCWLSLRVSHYQWTILIFLTSH 471
           L+  W  + ++    TILIF+TSH
Sbjct: 3   LSSAWFEV-IAAVLLTILIFVTSH 25


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +3

Query: 270 EPEEQPRSETPCQDNSGWESSSVDMNSSPLNP 365
           +  +QP S  P    S  +S       SP NP
Sbjct: 11  QQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNP 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,715
Number of Sequences: 438
Number of extensions: 3062
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)