Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17l01
         (370 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75531-5|CAA99800.1|  384|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z68296-3|CAB54197.2|  223|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U55774-2|AAA98009.3|  380|Caenorhabditis elegans Hypothetical pr...    26   7.3  
Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z66520-4|CAE48504.1|  174|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z49913-2|CAA90143.1|  660|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AC006742-6|AAF60498.1|  778|Caenorhabditis elegans Hypothetical ...    26   9.7  
AC006742-3|AAF60501.1|  778|Caenorhabditis elegans Hypothetical ...    26   9.7  

>Z75531-5|CAA99800.1|  384|Caenorhabditis elegans Hypothetical
           protein C54D10.5 protein.
          Length = 384

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -1

Query: 133 FRFFYALSVLIFYLSIPKIIRNLVNYIFLKTKSSIVL 23
           + F  A+ ++I+YL  PKI  +L+++ F   K+++ L
Sbjct: 349 YMFTSAIRIVIYYLCNPKIRGDLIDF-FANRKNAVYL 384


>Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical
           protein F43A11.4 protein.
          Length = 323

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 121 YALSVLIFYLSIPKIIRNLVNYIFLKTKSS 32
           + L+ LIF   I KII  L++YI L+  SS
Sbjct: 130 FILTTLIFVYRIVKIIMELIHYIPLQCFSS 159


>Z68296-3|CAB54197.2|  223|Caenorhabditis elegans Hypothetical
           protein C46C2.5 protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 76  LFSEYLNKRSAQRERKRNEMKIYYNK 153
           LF  + N RS   + K N+MK+ +NK
Sbjct: 190 LFDTFSNSRSILSQIKENKMKLEFNK 215


>U55774-2|AAA98009.3|  380|Caenorhabditis elegans Hypothetical
           protein F35G8.1 protein.
          Length = 380

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 133 FRFFYALSVLIFYLSIPKIIRNLVNY 56
           +R FY LSVL+   +IP ++ +L ++
Sbjct: 184 YRLFYGLSVLVIRSAIPLVLISLCHW 209


>Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical
           protein F49E12.5a protein.
          Length = 335

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/46 (26%), Positives = 27/46 (58%)
 Frame = -3

Query: 221 IKLYYAHLNLLNSKYNSISVSYNLL*YIFISFLLRSLCADLLFKYS 84
           ++LY ++  +L++ +N I    +L    F+ + ++ LCA  + +YS
Sbjct: 17  LELYRSYKYILSTSFNIIIPIISLF---FLVYAIKQLCAQSIIQYS 59


>Z66520-4|CAE48504.1|  174|Caenorhabditis elegans Hypothetical
           protein F49E12.5b protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/46 (26%), Positives = 27/46 (58%)
 Frame = -3

Query: 221 IKLYYAHLNLLNSKYNSISVSYNLL*YIFISFLLRSLCADLLFKYS 84
           ++LY ++  +L++ +N I    +L    F+ + ++ LCA  + +YS
Sbjct: 32  LELYRSYKYILSTSFNIIIPIISLF---FLVYAIKQLCAQSIIQYS 74


>Z49913-2|CAA90143.1|  660|Caenorhabditis elegans Hypothetical
           protein ZK938.3 protein.
          Length = 660

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 88  YLNKRSAQRERKRNE 132
           Y+ KR A+RERKR E
Sbjct: 334 YIRKRCAERERKRKE 348


>AC006742-6|AAF60498.1|  778|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.2 protein.
          Length = 778

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 148 YNISS-FRFFYALSVLIFYLSIPK 80
           YN    F FFY L+VL   +S+PK
Sbjct: 299 YNFMQYFSFFYVLAVLFAQMSMPK 322


>AC006742-3|AAF60501.1|  778|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.6 protein.
          Length = 778

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 148 YNISS-FRFFYALSVLIFYLSIPK 80
           YN    F FFY L+VL   +S+PK
Sbjct: 299 YNFMQYFSFFYVLAVLFAQMSMPK 322


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,063,013
Number of Sequences: 27780
Number of extensions: 99550
Number of successful extensions: 259
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)