Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17k17
(663 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 28 1.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.8
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 1.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 2.4
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 4.2
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.6
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 25 7.4
SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase |Schizosacchar... 25 9.7
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 540 KTLTPKSST-SYGATTPFFSVSSKNT 614
KTLT + ST SYG T PFFS+SS T
Sbjct: 96 KTLTNELSTWSYGLT-PFFSISSIKT 120
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 471 SMISTPWSSETWDSAVFNSANSEK----TLTPKSSTSYGATTPFFSVSSKNTLTLLESAV 638
S S+P SS + S+ +S +S T + KSS+S+ +T S +S +TLT S+
Sbjct: 331 SFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSS 390
Query: 639 S 641
S
Sbjct: 391 S 391
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 480 STPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLT 620
STP SS +A +++++ T ++T+ ++TP SVSS N+ T
Sbjct: 289 STPLSSANSTTAT-SASSTPLTSVNSTTTTSASSTPLSSVSSANSTT 334
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 471 SMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSS 605
S STP +S SA S+ + +STS +T P ++ SS
Sbjct: 369 SASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSS 413
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 471 SMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSS 605
S STP +S SA S+ + +STS +T P ++ SS
Sbjct: 483 SASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSS 527
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 471 SMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVS 641
S STP SS + S+ +S++S+ + + KSS+S +++ S SS ++ + S+ S
Sbjct: 149 SSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSS 205
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S+ + T TP SST ++TP S S N+ T + S+ +L
Sbjct: 3021 STPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTAL 3078
Score = 26.2 bits (55), Expect = 4.2
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSLMK 650
STP +S T S S+ T TP SST ++TP S ++ NT T + S+ L
Sbjct: 2265 STPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNS 2324
Query: 651 VT 656
T
Sbjct: 2325 ST 2326
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S++ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 657 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTAL 714
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S+ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 3273 STPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTAL 3330
Score = 25.4 bits (53), Expect = 7.4
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S++ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 1557 STPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL 1614
Score = 25.4 bits (53), Expect = 7.4
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S+ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 1725 STPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL 1782
Score = 25.4 bits (53), Expect = 7.4
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S++ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 2817 STPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL 2874
Score = 25.4 bits (53), Expect = 7.4
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSLMK 650
STP +S + S S+ T TP SST ++TP S ++ NT T + S+ L
Sbjct: 2997 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSTVLNS 3056
Query: 651 VT 656
T
Sbjct: 3057 ST 3058
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S+ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 477 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL 534
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S++ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 1749 STPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL 1806
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S+ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 1821 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL 1878
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S+ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 2013 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL 2070
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S+ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 2589 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL 2646
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 480 STPWSSETW--DSAVFNSANSEKTLTP-KSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
STP +S T S S+ + TP SST+ +TP S S N+ T + S+ +L
Sbjct: 2913 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL 2970
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 525 SANSEKTLTPKSSTSYGATTPFFSVSSKNTLT 620
S S + T +S+SY TTP FS+ +T
Sbjct: 532 SPPSPSSSTKSASSSYSTTTPAFSIGPLTPMT 563
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.8 bits (54), Expect = 5.6
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Frame = +1
Query: 238 PLLSYFNDVCNPHSELKWY*EGDTAKSSAVRPLPYRNTSAK*PLTRVQNRKHLKARLHLT 417
PLL FND P + K S + R+ ++ LT + + + LH
Sbjct: 168 PLLKSFNDSAIPENAANLSSSSKNMKDSTLSSQKARSNTSSSFLTPLHEQLESRCALHTA 227
Query: 418 RRTPANLK--LRL*QRKTP*A*SVLLGAVKRGT 510
+ P K LR + +P + +L A+ T
Sbjct: 228 AKDPFRSKNSLRCNRGHSPLSSQQILPAISNNT 260
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 25.4 bits (53), Expect = 7.4
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 452 NNGRHLEHDQYSLEQ*NVGLCRFQQ-CKFREDANTEIFHVLWSYDTVL*RQQQKHFDVIR 628
N G + +E N+G+C F+Q KF D + + V+ + L + HF +
Sbjct: 37 NGGTASNGAESKMENVNIGVCDFEQLVKFALDKDVNL--VIPGPELPLVEGIEGHFRRVG 94
Query: 629 ISCF 640
I CF
Sbjct: 95 IPCF 98
>SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 531 NSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSL 644
N +P SSTS P F+ S +N+ + ES ++L
Sbjct: 38 NPSSLTSPSSSTSVDKKKPLFTKSPRNSAS-CESTITL 74
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,436,055
Number of Sequences: 5004
Number of extensions: 46280
Number of successful extensions: 162
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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