Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17k16
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0774 - 21047696-21048889 113 1e-25
01_06_1220 + 35493575-35494765 111 6e-25
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 109 2e-24
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 108 3e-24
07_03_1371 - 26100553-26101767 107 1e-23
03_06_0127 - 31872840-31872912,31873021-31873115,31873199-318732... 107 1e-23
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 104 7e-23
02_01_0042 + 295608-296222,298479-298925 52 5e-07
06_01_0033 - 346273-347355 49 3e-06
10_08_0381 + 17398972-17399014,17400823-17400981,17401066-174012... 42 6e-04
06_03_1298 + 29141578-29141623,29142129-29142250,29143818-291438... 30 1.8
03_06_0284 + 32836171-32836377,32836466-32836568,32836681-328367... 29 3.1
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 28 7.2
03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498,664... 28 7.2
10_05_0114 + 9294747-9294788,9294883-9294996,9295066-9295173,929... 27 9.6
08_02_0530 + 18244933-18245217,18245309-18245383,18246176-182462... 27 9.6
>08_02_0774 - 21047696-21048889
Length = 397
Score = 113 bits (272), Expect = 1e-25
Identities = 57/157 (36%), Positives = 94/157 (59%)
Frame = +3
Query: 171 KKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLP 350
K + I + + +V+V+GAA IG + L +K + VS+LHLYD + +KG +LS+
Sbjct: 65 KSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIAN-VKGVAADLSHCN 123
Query: 351 GGPSVSAFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQN 530
V F G + L + ++VV+ + +PRKPG TR+ + NA +++ L +A+A
Sbjct: 124 TPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVADNC 183
Query: 531 QEAFVAISTNPINYLIPFASTVMYKYGCYNPSKMFGI 641
EAF+ I +NP+N +P A+ V+ + G YNP K+FG+
Sbjct: 184 PEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGV 220
>01_06_1220 + 35493575-35494765
Length = 396
Score = 111 bits (266), Expect = 6e-25
Identities = 56/152 (36%), Positives = 91/152 (59%)
Frame = +3
Query: 186 ILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSV 365
I + + +V+V+GAA IG + L +K + VS LHLYD + +KG +LS+ V
Sbjct: 70 ISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSALHLYDIAN-VKGVAADLSHCNTPSQV 128
Query: 366 SAFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFV 545
F G + L + ++VV+ + +PRKPG TR+ + NA +++ L +A+A EAF+
Sbjct: 129 LDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKTLVEAVADNCPEAFI 188
Query: 546 AISTNPINYLIPFASTVMYKYGCYNPSKMFGI 641
I +NP+N +P A+ V+ + G YNP K+FG+
Sbjct: 189 HIISNPVNSTVPIAAEVLKQKGVYNPKKLFGV 220
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 109 bits (262), Expect = 2e-24
Identities = 54/145 (37%), Positives = 86/145 (59%)
Frame = +3
Query: 207 QVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDT 386
+V+++GAA IG +SL +K N VS L LYD G ++S++ V F+GD
Sbjct: 29 KVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGT-PGVAADVSHINAPAQVKGFMGDD 87
Query: 387 NLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAISTNPI 566
L +A+ S++V++ + +PRKPG TR+ + NA +++ LC AIA A V + +NP+
Sbjct: 88 QLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPNALVNMISNPV 147
Query: 567 NYLIPFASTVMYKYGCYNPSKMFGI 641
N +P A+ V K G Y+ K+FG+
Sbjct: 148 NSTVPIAAEVFKKAGTYDEKKLFGV 172
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 108 bits (260), Expect = 3e-24
Identities = 52/145 (35%), Positives = 87/145 (60%)
Frame = +3
Query: 207 QVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDT 386
+V+++GA+ IG ++L +K N VS LHLYD + G ++S++ G V F+G
Sbjct: 59 KVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNT-PGVTADISHMNTGAVVRGFLGQP 117
Query: 387 NLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAISTNPI 566
LE A+ +LV++ + +PRKPG TR+ + NA +++ LC+ IA A V + +NP+
Sbjct: 118 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNPV 177
Query: 567 NYLIPFASTVMYKYGCYNPSKMFGI 641
N +P A+ V K G Y+P ++ G+
Sbjct: 178 NSTVPIAAEVFKKAGTYDPKRLLGV 202
>07_03_1371 - 26100553-26101767
Length = 404
Score = 107 bits (256), Expect = 1e-23
Identities = 53/155 (34%), Positives = 90/155 (58%)
Frame = +3
Query: 177 NTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGG 356
N ++ Q +V+++GAA IG +SL +K + VS LHLYD + + G +L +
Sbjct: 69 NRVVAQAGGYKVAILGAAGGIGQPLSLLVKMSPLVSALHLYDIAN-VDGVTADLGHCNTP 127
Query: 357 PSVSAFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQE 536
V+ F G L + ++VV+ + +PRKPG TR+ + G NA +++ L +A+A
Sbjct: 128 AKVAGFTGKEELAGCLAGVDVVVIPAGVPRKPGMTRDDLFGINAGIVRELVEAVADHAPA 187
Query: 537 AFVAISTNPINYLIPFASTVMYKYGCYNPSKMFGI 641
A V + +NP+N +P A+ V+ + G Y+P K+FG+
Sbjct: 188 ALVHVISNPVNSTVPIAAEVLKRKGVYDPRKLFGV 222
>03_06_0127 -
31872840-31872912,31873021-31873115,31873199-31873288,
31873364-31873399,31874039-31874122,31874223-31874312,
31874426-31874740,31875674-31875883,31875965-31876036
Length = 354
Score = 107 bits (256), Expect = 1e-23
Identities = 53/145 (36%), Positives = 86/145 (59%)
Frame = +3
Query: 207 QVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDT 386
+V+V+GAA IG +SL +K N VS LHLYD + G ++S++ V F+G
Sbjct: 44 KVAVLGAAGGIGQPLSLLMKLNPLVSVLHLYDVVNT-PGVTADVSHMDTTAVVRGFLGPN 102
Query: 387 NLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAISTNPI 566
LE A+ +LV++ + +PRKPG TR+ + NA +++ LC+ +A A V + +NP+
Sbjct: 103 QLEAALTGMDLVIIPAGLPRKPGMTRDDLFNKNAGIVRSLCEGVAKCCPNAIVNLISNPV 162
Query: 567 NYLIPFASTVMYKYGCYNPSKMFGI 641
N +P A+ V K G Y+P ++ G+
Sbjct: 163 NSTVPIAAEVFKKAGTYDPKRLLGV 187
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 104 bits (249), Expect = 7e-23
Identities = 51/145 (35%), Positives = 86/145 (59%)
Frame = +3
Query: 207 QVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDT 386
+V+++GAA IG ++L +K N VS L LYD G ++S++ V F+G+
Sbjct: 28 KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIAGT-PGVAADVSHINSPALVKGFVGEE 86
Query: 387 NLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAISTNPI 566
L +A+ S++V++ + +PRKPG TR+ + NA +++ LC AI+ A V + +NP+
Sbjct: 87 QLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCTAISKYCPNALVNMISNPV 146
Query: 567 NYLIPFASTVMYKYGCYNPSKMFGI 641
N +P A+ V K G Y+ K+FG+
Sbjct: 147 NSTVPIAAEVFKKAGTYDEKKLFGV 171
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Frame = +3
Query: 192 QKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDD-DDRIKGTELELSNLPGGPSVS 368
++R ++SVIGA + +G ++ + ++ L D D+++G L+L +
Sbjct: 36 RRRLTKISVIGAGN-VGMAIAQTILTRDMADEIALVDAVPDKLRGEMLDLQHAAAFLPRV 94
Query: 369 AFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVA 548
+ DT+L S+L ++ + + PG +R +L N L +++ A+A + EA +
Sbjct: 95 RLVSDTDLA-VTRGSDLAIVTAGARQIPGESRLNLLQRNVALFRKIVPALAEHSPEALLL 153
Query: 549 ISTNPINYLIPFASTVMYKYGCYNPSKMFG 638
I +NP++ L + V +K + S++ G
Sbjct: 154 IVSNPVDVL----TYVAWKLSGFPASRVIG 179
>06_01_0033 - 346273-347355
Length = 360
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Frame = +3
Query: 192 QKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDD-DDRIKGTELELSNLPGGPSVS 368
++R +++SVIGA + +G ++ + ++ L D D+++G L+L +
Sbjct: 35 RRRLIKISVIGAGN-VGMAIAQTILTQDLADEIVLIDAVADKVRGEMLDLQHAAAFLPRV 93
Query: 369 AFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVA 548
+ T + SS+LV++ + + PG TR +L N L +++ A A + E+ +
Sbjct: 94 NIVSGTEVSLT-RSSDLVIVTAGARQIPGETRLNLLQRNVSLFRKIVPAAAEASPESVLV 152
Query: 549 ISTNPINYLIPFASTVMYKYGCYNPSKMFG 638
I +NP++ L + V +K + S++ G
Sbjct: 153 IVSNPVDVL----TYVAWKLSGFPASRVIG 178
>10_08_0381 +
17398972-17399014,17400823-17400981,17401066-17401241,
17401565-17401842,17401938-17402073,17402183-17402294,
17402421-17402515
Length = 332
Score = 41.5 bits (93), Expect = 6e-04
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Frame = +3
Query: 189 LQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSK-----LHLYD---DDDRIKGTELELSN 344
+ K ++V V GAA IG + + R + LH+ D + + G ++EL +
Sbjct: 1 MAKEPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPATESLNGLKMELVD 60
Query: 345 LPGGPSVSAFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAA 524
P + + T++ +A N+ VMV PRK G R+ ++ N + + A+ A
Sbjct: 61 A-AFPLLKGIVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEA 119
Query: 525 Q-NQEAFVAISTNPIN 569
V + NP N
Sbjct: 120 HAAPNCKVLVVANPAN 135
>06_03_1298 +
29141578-29141623,29142129-29142250,29143818-29143874,
29143983-29144138,29144220-29144304,29144575-29144665,
29144807-29144971,29145064-29145186,29145334-29145409,
29145513-29145642,29145951-29147824,29148339-29148529,
29148697-29148860,29149164-29149275,29149276-29149294
Length = 1136
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 372 FIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAI-AAQNQEAFVA 548
F GD+ + L++ + R R+P N +L +++ I L A AA N F
Sbjct: 177 FAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTI 236
Query: 549 I---STNPINYLIPFASTVMYKYG 611
+P ++IPFA YG
Sbjct: 237 FYNPRASPTEFVIPFAKYQKAVYG 260
>03_06_0284 +
32836171-32836377,32836466-32836568,32836681-32836757,
32836846-32837037,32837144-32837263,32837350-32837412,
32837537-32837671,32837827-32837991,32838104-32838181,
32840303-32840389,32840548-32840619,32840925-32840951,
32842292-32842390,32843143-32843213,32843710-32843838,
32843936-32844012,32844186-32844226,32844319-32844393,
32844525-32844673,32844766-32844870,32844948-32845023,
32845465-32845541,32845761-32846529
Length = 997
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 327 ELELSNLPGGPSVSAFIGDTNLE-QAIHSSNLVVMVSR-MPRKPGNTREQMLGANAPLI 497
+L L++ PG SV + D+N+ + H + + R +P NTR + G +A LI
Sbjct: 180 QLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 246 YVSLFLKRNSKVSKLHLYDDDDRIK-GTELELSNLPGGPSVSAFIGDTNLEQAIHSSNLV 422
Y+ FL+ +S + L ++DDDD G +E G A ++NL+ I+ + V
Sbjct: 148 YLKPFLEDDSLLHSLSVFDDDDEDDCGMPMEKGGCSAGNGSLAETCESNLKSIINDGSDV 207
Query: 423 V 425
+
Sbjct: 208 I 208
>03_02_0235 +
6644083-6644125,6645218-6645315,6645448-6645498,
6645573-6645686,6645771-6645971,6646047-6646148,
6647245-6647352,6647745-6647995,6648108-6648279,
6648341-6648397,6648555-6648710,6648807-6648857,
6649053-6649193,6649270-6649464,6649534-6649665,
6649768-6649941,6650396-6650635,6650761-6650955
Length = 826
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 177 NTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKG-TELELSNLPG 353
N +IL+ V+ S + + G+ V R + + L+D DD ++ L L L G
Sbjct: 423 NRVILENATVRASAVSTLAKFGALVDALKPRIFVLLRRCLFDTDDEVRDRATLYLQTLDG 482
Query: 354 GPSVSA 371
+V +
Sbjct: 483 EVAVGS 488
>10_05_0114 +
9294747-9294788,9294883-9294996,9295066-9295173,
9295774-9296145,9296584-9296652,9296754-9296825,
9297070-9297198,9297690-9297770,9298622-9298807,
9299135-9299860
Length = 632
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 560 VGRYSYKRFLILSCNGFAKSLNQWCISPEHLFSCITR 450
+G+ +YKRF IL + + QW + L C+ +
Sbjct: 241 IGKRNYKRFFILMASAVLLLIMQWLVGILVLILCLLK 277
>08_02_0530 +
18244933-18245217,18245309-18245383,18246176-18246292,
18246503-18246631,18246726-18246785,18247271-18247441,
18247596-18247689,18247860-18247951,18248071-18248220,
18248407-18248465,18249735-18249864
Length = 453
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -2
Query: 247 YEPISLAAPITDTCTFLFCKISVF-FFSCV--ANKQQNIFWAIFFQY 116
Y+P +A+ D C LFC + + FSC+ A++ + F + F Y
Sbjct: 108 YQPSQMASLGPDACYLLFCLMLAYEVFSCLYYASQSKIAFVSAIFTY 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,103,942
Number of Sequences: 37544
Number of extensions: 310903
Number of successful extensions: 719
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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