Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17k09
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063690-1|AAH63690.1|  593|Homo sapiens piggyBac transposable e...    31   4.7  
BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein.        31   4.7  
BC028954-1|AAH28954.2|  593|Homo sapiens piggyBac transposable e...    31   4.7  
AL138760-1|CAH70290.1|  593|Homo sapiens piggyBac transposable e...    31   4.7  

>BC063690-1|AAH63690.1|  593|Homo sapiens piggyBac transposable
           element derived 3 protein.
          Length = 593

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 387 LEKLTDIKNIPPAKSKKKQR-RNFQPDVRYGEYLQRCYVPFYSNHGSGQKKMKKPPPLGY 563
           L+ +     + P  SK  +R   F P+  Y  +     VP++  HG  Q    KP   GY
Sbjct: 237 LDPVDKFSKLRPLISKLNERCMKFVPNETYFSF-DEFMVPYFGRHGCKQFIRGKPIRFGY 295

Query: 564 KF 569
           KF
Sbjct: 296 KF 297


>BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein.
          Length = 1061

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 387 LEKLTDIKNIPPAKSKKKQR-RNFQPDVRYGEYLQRCYVPFYSNHGSGQKKMKKPPPLGY 563
           L+ +     + P  SK  +R   F P+  Y  +     VP++  HG  Q    KP   GY
Sbjct: 705 LDPVDKFSKLRPLISKLNERCMKFVPNETYFSF-DEFMVPYFGRHGCKQFIRGKPIRFGY 763

Query: 564 KF 569
           KF
Sbjct: 764 KF 765


>BC028954-1|AAH28954.2|  593|Homo sapiens piggyBac transposable
           element derived 3 protein.
          Length = 593

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 387 LEKLTDIKNIPPAKSKKKQR-RNFQPDVRYGEYLQRCYVPFYSNHGSGQKKMKKPPPLGY 563
           L+ +     + P  SK  +R   F P+  Y  +     VP++  HG  Q    KP   GY
Sbjct: 237 LDPVDKFSKLRPLISKLNERCMKFVPNETYFSF-DEFMVPYFGRHGCKQFIRGKPIRFGY 295

Query: 564 KF 569
           KF
Sbjct: 296 KF 297


>AL138760-1|CAH70290.1|  593|Homo sapiens piggyBac transposable
           element derived 3 protein.
          Length = 593

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 387 LEKLTDIKNIPPAKSKKKQR-RNFQPDVRYGEYLQRCYVPFYSNHGSGQKKMKKPPPLGY 563
           L+ +     + P  SK  +R   F P+  Y  +     VP++  HG  Q    KP   GY
Sbjct: 237 LDPVDKFSKLRPLISKLNERCMKFVPNETYFSF-DEFMVPYFGRHGCKQFIRGKPIRFGY 295

Query: 564 KF 569
           KF
Sbjct: 296 KF 297


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,320,540
Number of Sequences: 237096
Number of extensions: 1554204
Number of successful extensions: 3422
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3422
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)