Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17j23
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein.     29   5.5  
L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protei...    29   5.5  
BT021317-1|AAX33465.1| 1298|Drosophila melanogaster RE10602p pro...    29   5.5  
BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p pro...    29   5.5  
BT001872-1|AAN71644.1|  935|Drosophila melanogaster SD07661p pro...    29   5.5  
AE014297-881|AAO41523.1|  935|Drosophila melanogaster CG9755-PE,...    29   5.5  
AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,...    29   5.5  
AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,...    29   5.5  
AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,...    29   5.5  
AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,...    29   5.5  
BT021305-1|AAX33453.1|  297|Drosophila melanogaster RE17490p pro...    28   9.6  
BT001870-1|AAN71641.1| 2053|Drosophila melanogaster SD05534p pro...    28   9.6  
AE014134-3346|AAF53967.3|  310|Drosophila melanogaster CG9249-PA...    28   9.6  
AE013599-3786|AAF47145.2| 2053|Drosophila melanogaster CG3173-PA...    28   9.6  

>X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein.
          Length = 1533

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791


>L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protein
           protein.
          Length = 1533

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791


>BT021317-1|AAX33465.1| 1298|Drosophila melanogaster RE10602p
           protein.
          Length = 1298

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791


>BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p
           protein.
          Length = 1533

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791


>BT001872-1|AAN71644.1|  935|Drosophila melanogaster SD07661p
           protein.
          Length = 935

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 126 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 182

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 183 APWGMYPGNLI 193


>AE014297-881|AAO41523.1|  935|Drosophila melanogaster CG9755-PE,
           isoform E protein.
          Length = 935

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 126 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 182

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 183 APWGMYPGNLI 193


>AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,
           isoform B protein.
          Length = 1185

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 376 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 432

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 433 APWGMYPGNLI 443


>AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,
           isoform D protein.
          Length = 1533

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791


>AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,
           isoform C protein.
          Length = 1533

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791


>AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,
           isoform A protein.
          Length = 1533

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 115 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 294
           +Q+H AA           A N +Y  +     ++ N   ++ P  Y  ++    + Y  V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780

Query: 295 TSWGLYPGTLL 327
             WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791


>BT021305-1|AAX33453.1|  297|Drosophila melanogaster RE17490p
           protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 422 LISSSVGSQYRSNTGTCKSLE*GTLRSVYIHNN 520
           L+S S+G     ++ T KSL+ GT + V  H N
Sbjct: 23  LLSCSIGRNSTRSSSTAKSLDAGTQKEVRHHEN 55


>BT001870-1|AAN71641.1| 2053|Drosophila melanogaster SD05534p
           protein.
          Length = 2053

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +3

Query: 315 RDAANNSPSKRSASQNLPPTMRPTKNMRRETQCLSV*YLAVWVHNTEAIQ 464
           RD  N    + + ++N    +  T  +  E +CLS+  L +W+HN + ++
Sbjct: 311 RDQLNKRQQQDNYTRNFLKFLCTTSGIA-EVRCLSISRLELWIHNGKLVK 359


>AE014134-3346|AAF53967.3|  310|Drosophila melanogaster CG9249-PA
           protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 422 LISSSVGSQYRSNTGTCKSLE*GTLRSVYIHNN 520
           L+S S+G     ++ T KSL+ GT + V  H N
Sbjct: 15  LLSCSIGRNSTRSSSTAKSLDAGTQKEVRHHEN 47


>AE013599-3786|AAF47145.2| 2053|Drosophila melanogaster CG3173-PA
           protein.
          Length = 2053

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +3

Query: 315 RDAANNSPSKRSASQNLPPTMRPTKNMRRETQCLSV*YLAVWVHNTEAIQ 464
           RD  N    + + ++N    +  T  +  E +CLS+  L +W+HN + ++
Sbjct: 311 RDQLNKRQQQDNYTRNFLKFLCTTSGIA-EVRCLSISRLELWIHNGKLVK 359


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,864,757
Number of Sequences: 53049
Number of extensions: 471083
Number of successful extensions: 1341
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)