Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17j06
         (569 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023858-1|AAZ86779.1|  432|Drosophila melanogaster IP10803p pro...    34   0.16 
AY118893-1|AAM50753.1|  695|Drosophila melanogaster LD02947p pro...    34   0.16 
AE014297-1269|AAF54615.1|  695|Drosophila melanogaster CG10703-P...    34   0.16 
M17730-1|AAA28856.1|  378|Drosophila melanogaster protein ( D.me...    29   5.8  
AY113582-1|AAM29587.1|  230|Drosophila melanogaster RH33063p pro...    29   5.8  
AE014296-2812|AAF49400.1|  378|Drosophila melanogaster CG9668-PA...    29   5.8  

>BT023858-1|AAZ86779.1|  432|Drosophila melanogaster IP10803p
           protein.
          Length = 432

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 25/83 (30%), Positives = 42/83 (50%)
 Frame = +2

Query: 317 LTIAFLNKYKKYRAKDRIDELLNESKEAIRQTNEFLEKWRLRRIPTDFSYLDEEPQEIKP 496
           L +A  N+  K++      EL NE++  + +  + L+K R R +      LDE+ QEIK 
Sbjct: 202 LRLALKNERTKWQEAKA--ELENETRCKLNELEQLLQKQRQRSL----QLLDEKEQEIKT 255

Query: 497 LKLEVPILHMAIIDTLGTTRSLP 565
           L+    + H A    +G+T + P
Sbjct: 256 LQTSFEVFHSA--SGVGSTLATP 276


>AY118893-1|AAM50753.1|  695|Drosophila melanogaster LD02947p
           protein.
          Length = 695

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 25/83 (30%), Positives = 42/83 (50%)
 Frame = +2

Query: 317 LTIAFLNKYKKYRAKDRIDELLNESKEAIRQTNEFLEKWRLRRIPTDFSYLDEEPQEIKP 496
           L +A  N+  K++      EL NE++  + +  + L+K R R +      LDE+ QEIK 
Sbjct: 465 LRLALKNERTKWQEAKA--ELENETRCKLNELEQLLQKQRQRSL----QLLDEKEQEIKT 518

Query: 497 LKLEVPILHMAIIDTLGTTRSLP 565
           L+    + H A    +G+T + P
Sbjct: 519 LQTSFEVFHSA--SGVGSTLATP 539


>AE014297-1269|AAF54615.1|  695|Drosophila melanogaster CG10703-PA
           protein.
          Length = 695

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 25/83 (30%), Positives = 42/83 (50%)
 Frame = +2

Query: 317 LTIAFLNKYKKYRAKDRIDELLNESKEAIRQTNEFLEKWRLRRIPTDFSYLDEEPQEIKP 496
           L +A  N+  K++      EL NE++  + +  + L+K R R +      LDE+ QEIK 
Sbjct: 465 LRLALKNERTKWQEAKA--ELENETRCKLNELEQLLQKQRQRSL----QLLDEKEQEIKT 518

Query: 497 LKLEVPILHMAIIDTLGTTRSLP 565
           L+    + H A    +G+T + P
Sbjct: 519 LQTSFEVFHSA--SGVGSTLATP 539


>M17730-1|AAA28856.1|  378|Drosophila melanogaster protein (
           D.melanogaster opsinRh4 gene, exon 2. ).
          Length = 378

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 327 AIVNDKTSISMNMTGMLIGFSLPTNCVFFASSRNVFFTKQAILQNIVW 184
           A +   + I   MT   IG+    N +    +RN+ FTK  I+  I+W
Sbjct: 130 ASIGSYSGIGAGMTNAAIGYDR-YNVITKPMNRNMTFTKAVIMNIIIW 176


>AY113582-1|AAM29587.1|  230|Drosophila melanogaster RH33063p
           protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 327 AIVNDKTSISMNMTGMLIGFSLPTNCVFFASSRNVFFTKQAILQNIVW 184
           A +   + I   MT   IG+    N +    +RN+ FTK  I+  I+W
Sbjct: 130 ASIGSYSGIGAGMTNAAIGYDR-YNVITKPMNRNMTFTKAVIMNIIIW 176


>AE014296-2812|AAF49400.1|  378|Drosophila melanogaster CG9668-PA
           protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 327 AIVNDKTSISMNMTGMLIGFSLPTNCVFFASSRNVFFTKQAILQNIVW 184
           A +   + I   MT   IG+    N +    +RN+ FTK  I+  I+W
Sbjct: 130 ASIGSYSGIGAGMTNAAIGYDR-YNVITKPMNRNMTFTKAVIMNIIIW 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,387,270
Number of Sequences: 53049
Number of extensions: 522090
Number of successful extensions: 1372
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)