Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17i22
         (304 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX640674-1|CAE45806.1| 1280|Homo sapiens hypothetical protein pr...    31   0.87 
BC024725-1|AAH24725.1|  743|Homo sapiens ANKRD50 protein protein.      31   0.87 
AK127496-1|BAC87007.1| 1375|Homo sapiens protein ( Homo sapiens ...    31   0.87 
AB033049-1|BAA86537.2| 1089|Homo sapiens KIAA1223 protein protein.     31   0.87 
AF436845-1|AAL85274.1| 1101|Homo sapiens DNA helicase HEL308 pro...    28   6.2  

>BX640674-1|CAE45806.1| 1280|Homo sapiens hypothetical protein
            protein.
          Length = 1280

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +1

Query: 16   EMETSLENFPNFKSHLFDNYKLCSETSLTRLKSTKSLTNIKTLMKESNETFFGSAHFESD 195
            +M+ SL   PN  +H F +     ++++ R KS+ S  ++K+    S  T   +A  ++ 
Sbjct: 996  DMQPSLRGLPNGPTHAFSSPSESPDSTVDRQKSSLSNNSLKSSKNSSLRTTSSTATAQTV 1055

Query: 196  RLFSFTKL 219
             + SF  L
Sbjct: 1056 PIDSFHNL 1063


>BC024725-1|AAH24725.1|  743|Homo sapiens ANKRD50 protein protein.
          Length = 743

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +1

Query: 16  EMETSLENFPNFKSHLFDNYKLCSETSLTRLKSTKSLTNIKTLMKESNETFFGSAHFESD 195
           +M+ SL   PN  +H F +     ++++ R KS+ S  ++K+    S  T   +A  ++ 
Sbjct: 459 DMQPSLRGLPNGPTHAFSSPSESPDSTVDRQKSSLSNNSLKSSKNSSLRTTSSTATAQTV 518

Query: 196 RLFSFTKL 219
            + SF  L
Sbjct: 519 PIDSFHNL 526


>AK127496-1|BAC87007.1| 1375|Homo sapiens protein ( Homo sapiens cDNA
            FLJ45589 fis, clone BRTHA3014547, weakly  similar to
            Ankyrin 1. ).
          Length = 1375

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +1

Query: 16   EMETSLENFPNFKSHLFDNYKLCSETSLTRLKSTKSLTNIKTLMKESNETFFGSAHFESD 195
            +M+ SL   PN  +H F +     ++++ R KS+ S  ++K+    S  T   +A  ++ 
Sbjct: 1091 DMQPSLRGLPNGPTHAFSSPSESPDSTVDRQKSSLSNNSLKSSKNSSLRTTSSTATAQTV 1150

Query: 196  RLFSFTKL 219
             + SF  L
Sbjct: 1151 PIDSFHNL 1158


>AB033049-1|BAA86537.2| 1089|Homo sapiens KIAA1223 protein protein.
          Length = 1089

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +1

Query: 16   EMETSLENFPNFKSHLFDNYKLCSETSLTRLKSTKSLTNIKTLMKESNETFFGSAHFESD 195
            +M+ SL   PN  +H F +     ++++ R KS+ S  ++K+    S  T   +A  ++ 
Sbjct: 805  DMQPSLRGLPNGPTHAFSSPSESPDSTVDRQKSSLSNNSLKSSKNSSLRTTSSTATAQTV 864

Query: 196  RLFSFTKL 219
             + SF  L
Sbjct: 865  PIDSFHNL 872


>AF436845-1|AAL85274.1| 1101|Homo sapiens DNA helicase HEL308
           protein.
          Length = 1101

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +1

Query: 4   DERKEMETSLENFPNFKSHLFDNYKLCSETSLTRLKSTKSLTNIKTLMKESNETFFG 174
           D+++ +E   +   N  SHL   +    +T    L   K  TN+  +    N TFFG
Sbjct: 727 DKQQVLELITKPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFG 783


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,448,134
Number of Sequences: 237096
Number of extensions: 325944
Number of successful extensions: 703
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)