Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17i22
         (304 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   1.9  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   2.5  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   2.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    20   7.7  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 86  EHNL*LSNKCDLKFGKFSKEV 24
           E NL ++NK  LKF  F K +
Sbjct: 873 EGNLMINNKYALKFFPFDKHI 893


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 27 FFRKFPEFQIAF 62
          FF+K+PE+Q  F
Sbjct: 54 FFKKYPEYQRYF 65


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 27 FFRKFPEFQIAF 62
          FF+K+PE+Q  F
Sbjct: 54 FFKKYPEYQRYF 65


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 178 AHFESDRLFSFTKLDE 225
           A +  DRL+  TK+D+
Sbjct: 263 AGYTIDRLYELTKIDK 278


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,454
Number of Sequences: 438
Number of extensions: 1000
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)