Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17i19
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.8  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.0  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 417 IRKHDKMPTEEVLGPRKTMLILVIVVGCFAMLW 515
           +R H +     V    KT   L +VVG F   W
Sbjct: 287 VRSHQQSCINRVARETKTAGTLAVVVGGFVACW 319


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 243 VKIRIAPAPAEFSPGEGAPDSCQRKLSS*PDV 338
           V ++  P   +FS G GA   CQ + +  PD+
Sbjct: 4   VFVKEPPNRVDFSNGTGAVVECQARGNPQPDI 35


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 394 CVRAGRKRYENTTKCRPRRCWVRGRQCS 477
           C    R+RY+   +C+P + +  GR  S
Sbjct: 409 CPGRVRRRYQPAFRCKPSQRFASGRYYS 436


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +2

Query: 407 DENDTKTRQNADRGGVGSAEDNAHTSDCC--GMFRYVVAQDPVSADLGPHT 553
           + N+     N +  G G++ +N +    C  G+  Y    DP   DL P T
Sbjct: 246 NNNNNNNGANDNGNGNGASNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPET 296


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 241 IWEHPQILKLKKAGGLSW 188
           +W++P+  +L   G +SW
Sbjct: 354 LWQNPRTKRLVNIGIISW 371


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 344 IFIFNHTRRCFRRV*SAVYVRDENDTK 424
           + I+N+    F+R+ S+ +V D   TK
Sbjct: 210 LIIYNNADDSFQRLTSSTFVYDPRYTK 236


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -3

Query: 452 HLLGRHFVVFSYRFRPARTQPITLYGNIV 366
           +L   H   F Y F P   + + ++GN +
Sbjct: 555 NLSENHIEWFDYAFIPGNLKWLDIHGNFI 583


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,192
Number of Sequences: 438
Number of extensions: 4800
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)