Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17i12
         (612 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY224601-1|AAP50265.1|  158|Homo sapiens intraflagellar transpor...    87   6e-17
BC038094-1|AAH38094.1|  132|Homo sapiens IFT20 protein protein.        86   8e-17
BC002640-1|AAH02640.1|  148|Homo sapiens intraflagellar transpor...    44   4e-04
EF512550-1|ABP62932.1|  820|Homo sapiens neuroendocrine long coi...    29   9.8  
BC017354-1|AAH17354.1|  810|Homo sapiens janus kinase and microt...    29   9.8  
BC003189-1|AAH03189.1|  365|Homo sapiens Unknown (protein for IM...    29   9.8  
AF273057-1|AAM44460.1|  810|Homo sapiens CTCL tumor antigen HD-C...    29   9.8  
AB011127-1|BAA25481.2|  802|Homo sapiens KIAA0555 protein protein.     29   9.8  

>AY224601-1|AAP50265.1|  158|Homo sapiens intraflagellar transport
           protein 20-like protein protein.
          Length = 158

 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
 Frame = +2

Query: 245 SVMAEE-LQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXX 421
           + MA++ L +  L +D++NK++VL+  V + T +L++ CK++ +K+  F+          
Sbjct: 25  TAMAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKIGQFQKIVGGLIELV 84

Query: 422 XXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDXTSLLEQIDXEYDTLQILE 601
                  EN+KM AIGA NLLKSIAK +E++Q +LQA I +    LE+   EY+ L  +E
Sbjct: 85  DQLAKEAENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLERYRVEYEALCKVE 144

Query: 602 ATQ 610
           A Q
Sbjct: 145 AEQ 147


>BC038094-1|AAH38094.1|  132|Homo sapiens IFT20 protein protein.
          Length = 132

 Score = 86.2 bits (204), Expect = 8e-17
 Identities = 46/121 (38%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = +2

Query: 251 MAEE-LQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXX 427
           MA++ L +  L +D++NK++VL+  V + T +L++ CK++ +K+  F+            
Sbjct: 1   MAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKIGQFQKIVGGLIELVDQ 60

Query: 428 XGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDXTSLLEQIDXEYDTLQILEAT 607
                EN+KM AIGA NLLKSIAK +E++Q +LQA I +    LE+   EY+ L  +EA 
Sbjct: 61  LAKEAENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLERYRVEYEALCKVEAE 120

Query: 608 Q 610
           Q
Sbjct: 121 Q 121


>BC002640-1|AAH02640.1|  148|Homo sapiens intraflagellar transport
           20 homolog (Chlamydomonas) protein.
          Length = 148

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = +2

Query: 251 MAEE-LQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXX 427
           MA++ L +  L +D++NK++VL+  V + T +L++ CK++ +K+  F+            
Sbjct: 1   MAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKIGQFQKIVGGLIELVDQ 60

Query: 428 XGDNVENKKMAAI 466
                EN+KM ++
Sbjct: 61  LAKEAENEKMKSL 73


>EF512550-1|ABP62932.1|  820|Homo sapiens neuroendocrine long
           coiled-coil protein 1 protein.
          Length = 820

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
 Frame = +2

Query: 242 HSVMAEELQKVHLFYDDINKIKVLEENVLKDTE-DLRDTCKEYENKVQNFEXXXXXXXXX 418
           H+V+  EL K  L  + + +++ + EN++K  E ++  T K  + ++Q  +         
Sbjct: 66  HTVLVTEL-KAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQRLKSALCALR-- 122

Query: 419 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDXTSLLEQID 571
                D   +K   A+  +   +   K  ++E+LKL  EI D  +  +Q+D
Sbjct: 123 -----DGSSDKVRTAL-TIEAREEARKLFDTERLKLLQEIADLKTAKKQVD 167


>BC017354-1|AAH17354.1|  810|Homo sapiens janus kinase and
           microtubule interacting protein 2 protein.
          Length = 810

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
 Frame = +2

Query: 242 HSVMAEELQKVHLFYDDINKIKVLEENVLKDTE-DLRDTCKEYENKVQNFEXXXXXXXXX 418
           H+V+  EL K  L  + + +++ + EN++K  E ++  T K  + ++Q  +         
Sbjct: 66  HTVLVTEL-KAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQRLKSALCALR-- 122

Query: 419 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDXTSLLEQID 571
                D   +K   A+  +   +   K  ++E+LKL  EI D  +  +Q+D
Sbjct: 123 -----DGSSDKVRTAL-TIEAREEARKLFDTERLKLLQEIADLKTAKKQVD 167


>BC003189-1|AAH03189.1|  365|Homo sapiens Unknown (protein for
           IMAGE:3537913) protein.
          Length = 365

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
 Frame = +2

Query: 242 HSVMAEELQKVHLFYDDINKIKVLEENVLKDTE-DLRDTCKEYENKVQNFEXXXXXXXXX 418
           H+V+  EL K  L  + + +++ + EN++K  E ++  T K  + ++Q  +         
Sbjct: 66  HTVLVTEL-KAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQRLKSALCALR-- 122

Query: 419 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDXTSLLEQID 571
                D   +K   A+  +   +   K  ++E+LKL  EI D  +  +Q+D
Sbjct: 123 -----DGSSDKVRTAL-TIEAREEARKLFDTERLKLLQEIADLKTAKKQVD 167


>AF273057-1|AAM44460.1|  810|Homo sapiens CTCL tumor antigen
           HD-CL-04 protein.
          Length = 810

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
 Frame = +2

Query: 242 HSVMAEELQKVHLFYDDINKIKVLEENVLKDTE-DLRDTCKEYENKVQNFEXXXXXXXXX 418
           H+V+  EL K  L  + + +++ + EN++K  E ++  T K  + ++Q  +         
Sbjct: 66  HTVLVTEL-KAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQRLKSALCALR-- 122

Query: 419 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDXTSLLEQID 571
                D   +K   A+  +   +   K  ++E+LKL  EI D  +  +Q+D
Sbjct: 123 -----DGSSDKVRTAL-TIEAREEARKLFDTERLKLLQEIADLKTAKKQVD 167


>AB011127-1|BAA25481.2|  802|Homo sapiens KIAA0555 protein protein.
          Length = 802

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
 Frame = +2

Query: 242 HSVMAEELQKVHLFYDDINKIKVLEENVLKDTE-DLRDTCKEYENKVQNFEXXXXXXXXX 418
           H+V+  EL K  L  + + +++ + EN++K  E ++  T K  + ++Q  +         
Sbjct: 69  HTVLVTEL-KAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQRLKSALCALR-- 125

Query: 419 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDXTSLLEQID 571
                D   +K   A+  +   +   K  ++E+LKL  EI D  +  +Q+D
Sbjct: 126 -----DGSSDKVRTAL-TIEAREEARKLFDTERLKLLQEIADLKTAKKQVD 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,681,475
Number of Sequences: 237096
Number of extensions: 838578
Number of successful extensions: 1945
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1940
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)