Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17i07
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces... 150 2e-37
SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces po... 64 2e-11
SPAC732.01 |vma11||V-type ATPase proteolipid subunit|Schizosacch... 56 6e-09
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 30 0.35
SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces po... 29 0.46
SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosacc... 27 1.9
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 1.9
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 4.3
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 26 5.7
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 25 7.5
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 25 9.9
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 25 9.9
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 25 9.9
SPBC83.19c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.9
>SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 199
Score = 150 bits (364), Expect = 2e-37
Identities = 79/169 (46%), Positives = 98/169 (57%)
Frame = +3
Query: 165 IFSLYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGG 344
I LY + + GE G FL +TSPY WG LGIA VA ++GAA GI G SI+GG
Sbjct: 17 IVGLYMLFHNSGESFDFGSFLLDTSPYTWGLLGIASCVAFGIIGAAWGIFICGTSILGGA 76
Query: 345 VKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFG 524
VKAPRIKTKNLIS+IFCE VAIY LI AIV S K ++ + + ++ G+ +F
Sbjct: 77 VKAPRIKTKNLISIIFCEVVAIYSLIIAIVFSA---KINDINPAGFYTKSHYYTGFALFW 133
Query: 525 AGLAVGLVNLFCXXXXXXXXXXXXXXXXXXXXXFVKILIVEIFGSAIGL 671
G+ VGL NL C FVK+L+VEIFGS +GL
Sbjct: 134 GGITVGLCNLICGVCVGITGSSAALADAQDASLFVKVLVVEIFGSVLGL 182
>SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 161
Score = 64.1 bits (149), Expect = 2e-11
Identities = 39/141 (27%), Positives = 64/141 (45%)
Frame = +3
Query: 249 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 428
+G +G ++ + GAA G GV I GV P + KN I V+ +AIYGL+ +
Sbjct: 13 FGVMGCTAAIVFASFGAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVVS 72
Query: 429 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 608
+++SG L++ + +G++ GAGL+VGL L
Sbjct: 73 VLISGNLKQILSLY-----------SGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTA 121
Query: 609 XXXXXFVKILIVEIFGSAIGL 671
FV ++++ IF +GL
Sbjct: 122 QQPRLFVAMILILIFAEVLGL 142
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +3
Query: 258 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 437
LG SV L+ + A I G + V G + PR+ ++ +IF E + +YGLI A++L
Sbjct: 92 LGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVAMILILIFAEVLGLYGLIVALLL 151
Query: 438 S 440
+
Sbjct: 152 N 152
>SPAC732.01 |vma11||V-type ATPase proteolipid
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 162
Score = 55.6 bits (128), Expect = 6e-09
Identities = 36/141 (25%), Positives = 61/141 (43%)
Frame = +3
Query: 249 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 428
+G G+ S+ S +GA G G I G P I K+LI V+ + +YGL+ +
Sbjct: 13 FGFAGVCASMVFSCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMS 72
Query: 429 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 608
++++G + P S+ +G++ AGLAVGL +
Sbjct: 73 VLIAGDMS----PDNDYSL-----FSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFM 123
Query: 609 XXXXXFVKILIVEIFGSAIGL 671
FV ++++ IF +GL
Sbjct: 124 RQDRIFVSMVLILIFAEVLGL 144
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 29.9 bits (64), Expect = 0.35
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 620 GSVGSIR*SSTRAHDTNSNSTE*IHQANSESSAEHHV-SRHPVL 492
GSV + SS R + T +NS S+AE+HV SRH V+
Sbjct: 830 GSVSDVSFSSIRVNIAGVKITAKSSTSNSSSTAEYHVRSRHAVI 873
>SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 452
Score = 29.5 bits (63), Expect = 0.46
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 117 YFLSYLFVLLVGLAIPIF-SLYYVLNGKGEQISLGWFLENTSPY 245
Y L L L+G+ F ++YY L + + +L FL+NT PY
Sbjct: 302 YALRDLAAFLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKPY 345
>SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 878
Score = 27.5 bits (58), Expect = 1.9
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +3
Query: 174 LYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKA 353
L + LN K ++ + S + WG S+AL++VGA GI G VG ++
Sbjct: 785 LTFGLNSKDRKLDAKRLTKIVSGFHWGICQNVDSIALNIVGA--GIIRFGTQNVGCLLRI 842
Query: 354 PRIKTKNLI 380
+NLI
Sbjct: 843 EPNYEQNLI 851
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 437 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGD 264
E D++ +N A +G +L+ DS +++ +S VD+H S N KG+
Sbjct: 22 EQDAASVKINSTR-ASPNGSDLLNDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGE 78
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 84 TKYLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVLN 191
+ ++N+N+ +R ++S++ + +A SLY+ LN
Sbjct: 2008 SSFINENMYLRLWISHIASWIYAVASASGSLYFSLN 2043
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 402 VAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAG 509
++I + A +LS L Y+EPF +S KQ + G
Sbjct: 74 LSIIAICFACLLSPSLRPYAEPFIFLSYKQPDGSYG 109
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 25.4 bits (53), Expect = 7.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 671 KTNGRSKNLNDEDLDEQGSVGSIR*SSTRAHDTNSNSTE*IHQANSESSAEHH 513
+TNG S + N+ + + S S + + + +D+ SNS E I +SS HH
Sbjct: 56 ETNGASSSNNN--VAKSSSHDSFK-AKPKNYDSTSNSNEPISFNEPDSSNSHH 105
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 25.0 bits (52), Expect = 9.9
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -2
Query: 641 DEDL-DEQGSVGSIR*SST---RAHDTNSNSTE*IHQANSESSAE 519
DED D SV S +S + T SNS E + +NSESS E
Sbjct: 115 DEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDE 159
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.0 bits (52), Expect = 9.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -1
Query: 606 HPLEQHQSPRYQQQFHRIDS 547
HPL QH++P ++ + ++S
Sbjct: 109 HPLSQHKTPEFKHRKRNVES 128
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 383 GDQILSLDSRCFDTSSHYADTSSVDAH 303
GD+ LS S H+AD +S D H
Sbjct: 652 GDEYLSAVSEFIQRCFHFADEASPDGH 678
>SPBC83.19c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 119
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 523 PNITYPAIQFCCLTDTL 473
PN + FCC TDTL
Sbjct: 56 PNARFSYSPFCCFTDTL 72
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,772,853
Number of Sequences: 5004
Number of extensions: 59153
Number of successful extensions: 209
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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