Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17i05
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF115515-1|AAO06952.1| 277|Homo sapiens MSTP052 protein. 45 2e-04
BC064898-1|AAH64898.1| 294|Homo sapiens C3orf33 protein protein. 45 2e-04
BC042198-1|AAH42198.1| 293|Homo sapiens C3orf33 protein protein. 45 2e-04
AK055701-1|BAB70989.1| 251|Homo sapiens protein ( Homo sapiens ... 44 3e-04
AF118395-1|AAD28559.1| 376|Homo sapiens trans-prenyltransferase... 30 7.5
BC126431-1|AAI26432.1| 315|Homo sapiens VPS16 protein protein. 29 9.9
BC073959-1|AAH73959.1| 524|Homo sapiens VPS16 protein protein. 29 9.9
BC021291-1|AAH21291.2| 371|Homo sapiens VPS16 protein protein. 29 9.9
BC012422-1|AAH12422.1| 415|Homo sapiens VPS16 protein protein. 29 9.9
AL834401-1|CAD39063.1| 694|Homo sapiens hypothetical protein pr... 29 9.9
AL161656-9|CAI12123.1| 525|Homo sapiens vacuolar protein sortin... 29 9.9
AL161656-6|CAI12120.1| 695|Homo sapiens vacuolar protein sortin... 29 9.9
AL161656-5|CAC21465.1| 839|Homo sapiens vacuolar protein sortin... 29 9.9
AK055787-1|BAB71013.1| 695|Homo sapiens protein ( Homo sapiens ... 29 9.9
AF308801-1|AAG34678.1| 839|Homo sapiens vacuolar protein sortin... 29 9.9
>AF115515-1|AAO06952.1| 277|Homo sapiens MSTP052 protein.
Length = 277
Score = 45.2 bits (102), Expect = 2e-04
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +1
Query: 175 LATAGLAISVHKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPVRV-LVNHKAPIY 351
+A AG+ + + IR SKF+ +S +P FIR + L+G + + + + + PI
Sbjct: 27 MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 86
Query: 352 LPLWHSSKPPLPVKLWGIEVV-SGNAVNWLECVARGQQVT-LKPIGRDNDDLVSTVLLH 522
L + L VKL G+E+ +G A WL+ + Q+ ++ +G++N L +L++
Sbjct: 87 ASLRKEPRGALLVKLAGVELAETGKA--WLQKELKPSQLLWVQLLGKENSALFCYLLVN 143
>BC064898-1|AAH64898.1| 294|Homo sapiens C3orf33 protein protein.
Length = 294
Score = 44.8 bits (101), Expect = 2e-04
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Frame = +1
Query: 175 LATAGLAISVHKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPVRV-LVNHKAPIY 351
+A AG+ + + IR SKF+ +S +P FIR + L+G + + + + + PI
Sbjct: 44 MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 103
Query: 352 LPLWHSSKPPLPVKLWGIEVV-SGNAVNWLECVARGQQVT-LKPIGRDNDDLVSTVLLH 522
L + L VKL G+E+ +G A WL+ + Q+ + +G++N L +L++
Sbjct: 104 ASLRKEPRGALLVKLAGVELAETGKA--WLQKELKPSQLLWFQLLGKENSALFCYLLVN 160
>BC042198-1|AAH42198.1| 293|Homo sapiens C3orf33 protein protein.
Length = 293
Score = 44.8 bits (101), Expect = 2e-04
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Frame = +1
Query: 175 LATAGLAISVHKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPVRV-LVNHKAPIY 351
+A AG+ + + IR SKF+ +S +P FIR + L+G + + + + + PI
Sbjct: 43 MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 102
Query: 352 LPLWHSSKPPLPVKLWGIEVV-SGNAVNWLECVARGQQVT-LKPIGRDNDDLVSTVLLH 522
L + L VKL G+E+ +G A WL+ + Q+ + +G++N L +L++
Sbjct: 103 ASLRKEPRGALLVKLAGVELAETGKA--WLQKELKPSQLLWFQLLGKENSALFCYLLVN 159
>AK055701-1|BAB70989.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ31139 fis, clone IMR322001185. ).
Length = 251
Score = 44.4 bits (100), Expect = 3e-04
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Frame = +1
Query: 175 LATAGLAISVHKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPVRV-LVNHKAPIY 351
+A AG+ + + IR SKF+ +S +P FIR + L+G + + + + + PI
Sbjct: 1 MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 60
Query: 352 LPLWHSSKPPLPVKLWGIEVV-SGNAVNWLECVARGQQVT-LKPIGRDNDDLVSTVLL 519
L + L VKL G+E+ +G A WL+ + Q+ + +G++N L +L+
Sbjct: 61 ASLRKEPRGALLVKLAGVELAETGKA--WLQKELKPSQLLWFQLLGKENSALFCYLLV 116
>AF118395-1|AAD28559.1| 376|Homo sapiens trans-prenyltransferase
protein.
Length = 376
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 205 HKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPV 318
H P SK K D F LKGLY G++ P+
Sbjct: 39 HHTTPYSKTHSGEKYTDPFKLGWRDLKGLYEGIRKEPL 76
>BC126431-1|AAI26432.1| 315|Homo sapiens VPS16 protein protein.
Length = 315
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 10 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 57
>BC073959-1|AAH73959.1| 524|Homo sapiens VPS16 protein protein.
Length = 524
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 219 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 266
>BC021291-1|AAH21291.2| 371|Homo sapiens VPS16 protein protein.
Length = 371
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 66 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 113
>BC012422-1|AAH12422.1| 415|Homo sapiens VPS16 protein protein.
Length = 415
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 110 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 157
>AL834401-1|CAD39063.1| 694|Homo sapiens hypothetical protein
protein.
Length = 694
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 389 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 436
>AL161656-9|CAI12123.1| 525|Homo sapiens vacuolar protein sorting
16 (yeast) protein.
Length = 525
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 220 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 267
>AL161656-6|CAI12120.1| 695|Homo sapiens vacuolar protein sorting
16 (yeast) protein.
Length = 695
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 390 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 437
>AL161656-5|CAC21465.1| 839|Homo sapiens vacuolar protein sorting
16 (yeast) protein.
Length = 839
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 534 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 581
>AK055787-1|BAB71013.1| 695|Homo sapiens protein ( Homo sapiens
cDNA FLJ31225 fis, clone KIDNE2004344, weakly similar to
Vacuolar protein sorting-associated protein. ).
Length = 695
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 390 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 437
>AF308801-1|AAG34678.1| 839|Homo sapiens vacuolar protein sorting
protein 16 protein.
Length = 839
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 382 LPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVSTVLLHL 525
L +KL E SG V L + R + K I + DLV TVLLHL
Sbjct: 534 LAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHL 581
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,691,966
Number of Sequences: 237096
Number of extensions: 2011937
Number of successful extensions: 3425
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3425
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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