Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17h24
(494 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like pro... 32 1.3
BC022777-1|AAH22777.1| 422|Homo sapiens acylglycerol kinase pro... 32 1.3
AK222769-1|BAD96489.1| 422|Homo sapiens multi-substrate lipid k... 32 1.3
AK001704-1|BAA91848.1| 422|Homo sapiens protein ( Homo sapiens ... 32 1.3
AJ278150-1|CAB93536.1| 422|Homo sapiens putative lipid kinase p... 32 1.3
AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein. 32 1.3
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 1.7
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 1.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 1.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 1.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 1.7
AL136172-7|CAI95719.2| 599|Homo sapiens chromosome 20 open read... 31 2.2
AL031659-6|CAI42666.2| 599|Homo sapiens chromosome 20 open read... 31 2.2
BT006956-1|AAP35602.1| 720|Homo sapiens zinc finger protein 219... 30 5.1
BC150572-1|AAI50573.1| 337|Homo sapiens LRRC55 protein protein. 30 5.1
BC036105-1|AAH36105.1| 722|Homo sapiens zinc finger protein 219... 30 5.1
BC000694-1|AAH00694.1| 720|Homo sapiens zinc finger protein 219... 30 5.1
AK127591-1|BAC87047.1| 341|Homo sapiens protein ( Homo sapiens ... 30 5.1
AB015427-1|BAA90526.1| 722|Homo sapiens zinc finger protein 219... 30 5.1
AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic su... 29 6.7
AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic su... 29 6.7
AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic su... 29 6.7
AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic su... 29 6.7
AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 6.7
AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 6.7
AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 6.7
AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 6.7
AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 6.7
AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 6.7
AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta pro... 29 6.7
BC038738-1|AAH38738.1| 64|Homo sapiens C12orf61 protein protein. 29 8.9
>BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like
protein rA9 protein.
Length = 1649
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 222 TATTERLSRQHRPNAPRGRKSTAEMLSAVRCALSQLQGEPEPNLIVPTNEKPIEP 386
++ T RQHR RG+K +E + R A + P + +P+ KP+EP
Sbjct: 363 SSATRSKKRQHRVKKRRGKKVKSEATTRSRIARTLGLRRPVHSSCIPSVLKPVEP 417
>BC022777-1|AAH22777.1| 422|Homo sapiens acylglycerol kinase
protein.
Length = 422
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 239 FISATSTK-RSPRQEVNSRDAVSRQMCPLPAPRGAGTQFN-SSNKREANRTGLILVVRCL 412
FI+ S K R+P+ V + + C L P GAG F+ S + EA + L+ R L
Sbjct: 345 FITIGSRKVRNPKLHVEGTECLQASQCTLLIPEGAGGSFSIDSEEYEAMPVEVKLLPRKL 404
Query: 413 QSPC 424
Q C
Sbjct: 405 QFFC 408
>AK222769-1|BAD96489.1| 422|Homo sapiens multi-substrate lipid
kinase variant protein.
Length = 422
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 239 FISATSTK-RSPRQEVNSRDAVSRQMCPLPAPRGAGTQFN-SSNKREANRTGLILVVRCL 412
FI+ S K R+P+ V + + C L P GAG F+ S + EA + L+ R L
Sbjct: 345 FITIGSRKVRNPKLHVEGTECLQASQCTLLIPEGAGGSFSIDSEEYEAMPVEVKLLPRKL 404
Query: 413 QSPC 424
Q C
Sbjct: 405 QFFC 408
>AK001704-1|BAA91848.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ10842 fis, clone NT2RP4001343. ).
Length = 422
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 239 FISATSTK-RSPRQEVNSRDAVSRQMCPLPAPRGAGTQFN-SSNKREANRTGLILVVRCL 412
FI+ S K R+P+ V + + C L P GAG F+ S + EA + L+ R L
Sbjct: 345 FITIGSRKVRNPKLHVEGTECLQASQCTLLIPEGAGGSFSIDSEEYEAMPVEVKLLPRKL 404
Query: 413 QSPC 424
Q C
Sbjct: 405 QFFC 408
>AJ278150-1|CAB93536.1| 422|Homo sapiens putative lipid kinase
protein.
Length = 422
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 239 FISATSTK-RSPRQEVNSRDAVSRQMCPLPAPRGAGTQFN-SSNKREANRTGLILVVRCL 412
FI+ S K R+P+ V + + C L P GAG F+ S + EA + L+ R L
Sbjct: 345 FITIGSRKVRNPKLHVEGTECLQASQCTLLIPEGAGGSFSIDSEEYEAMPVEVKLLPRKL 404
Query: 413 QSPC 424
Q C
Sbjct: 405 QFFC 408
>AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.
Length = 1654
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 222 TATTERLSRQHRPNAPRGRKSTAEMLSAVRCALSQLQGEPEPNLIVPTNEKPIEP 386
++ T RQHR RG+K +E + R A + P + +P+ KP+EP
Sbjct: 368 SSATRSKKRQHRVKKRRGKKVKSEATTRSRIARTLGLRRPVHSSCIPSVLKPVEP 422
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.5 bits (68), Expect = 1.7
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 173 EARGQDRQRHDEDPSSHRHD*AFISATSTKRSPRQEVNSRDAVSRQMCPLPAPRGAGTQF 352
E R + RH PS + A S +S +R ++ R P P PRG +
Sbjct: 1715 ETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGL-QRS 1773
Query: 353 NSSNKREANRT 385
S ++RE RT
Sbjct: 1774 RSRSRREKTRT 1784
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.5 bits (68), Expect = 1.7
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 173 EARGQDRQRHDEDPSSHRHD*AFISATSTKRSPRQEVNSRDAVSRQMCPLPAPRGAGTQF 352
E R + RH PS + A S +S +R ++ R P P PRG +
Sbjct: 747 ETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGL-QRS 805
Query: 353 NSSNKREANRT 385
S ++RE RT
Sbjct: 806 RSRSRREKTRT 816
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 31.5 bits (68), Expect = 1.7
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 173 EARGQDRQRHDEDPSSHRHD*AFISATSTKRSPRQEVNSRDAVSRQMCPLPAPRGAGTQF 352
E R + RH PS + A S +S +R ++ R P P PRG +
Sbjct: 1715 ETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGL-QRS 1773
Query: 353 NSSNKREANRT 385
S ++RE RT
Sbjct: 1774 RSRSRREKTRT 1784
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 31.5 bits (68), Expect = 1.7
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 173 EARGQDRQRHDEDPSSHRHD*AFISATSTKRSPRQEVNSRDAVSRQMCPLPAPRGAGTQF 352
E R + RH PS + A S +S +R ++ R P P PRG +
Sbjct: 238 ETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGL-QRS 296
Query: 353 NSSNKREANRT 385
S ++RE RT
Sbjct: 297 RSRSRREKTRT 307
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.5 bits (68), Expect = 1.7
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 173 EARGQDRQRHDEDPSSHRHD*AFISATSTKRSPRQEVNSRDAVSRQMCPLPAPRGAGTQF 352
E R + RH PS + A S +S +R ++ R P P PRG +
Sbjct: 1763 ETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGL-QRS 1821
Query: 353 NSSNKREANRT 385
S ++RE RT
Sbjct: 1822 RSRSRREKTRT 1832
>AL136172-7|CAI95719.2| 599|Homo sapiens chromosome 20 open reading
frame 132 protein.
Length = 599
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 218 SHRHD*AFISATSTKRSPRQEVNSRDAVSRQMCPLPAPRGAG 343
S RH ++ T T P + R+ S+ +CP P P G G
Sbjct: 3 SPRHQPRQVAGTPTSSQPSFGPSIRERPSQSLCPCPCPAGEG 44
>AL031659-6|CAI42666.2| 599|Homo sapiens chromosome 20 open reading
frame 132 protein.
Length = 599
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 218 SHRHD*AFISATSTKRSPRQEVNSRDAVSRQMCPLPAPRGAG 343
S RH ++ T T P + R+ S+ +CP P P G G
Sbjct: 3 SPRHQPRQVAGTPTSSQPSFGPSIRERPSQSLCPCPCPAGEG 44
>BT006956-1|AAP35602.1| 720|Homo sapiens zinc finger protein 219
protein.
Length = 720
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 206 RRVSVGPVLGPLVARTEVAGHAGGSAAKQAPQP--FIEDATSPRP 78
+R GP P G A S AK +PQP ++E A+SPRP
Sbjct: 550 QRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP 594
>BC150572-1|AAI50573.1| 337|Homo sapiens LRRC55 protein protein.
Length = 337
Score = 29.9 bits (64), Expect = 5.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 299 QHLCC*LPASGSVWSMLP 246
QH CC LP G W+ LP
Sbjct: 31 QHCCCLLPKMGDTWAQLP 48
>BC036105-1|AAH36105.1| 722|Homo sapiens zinc finger protein 219
protein.
Length = 722
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 206 RRVSVGPVLGPLVARTEVAGHAGGSAAKQAPQP--FIEDATSPRP 78
+R GP P G A S AK +PQP ++E A+SPRP
Sbjct: 552 QRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP 596
>BC000694-1|AAH00694.1| 720|Homo sapiens zinc finger protein 219
protein.
Length = 720
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 206 RRVSVGPVLGPLVARTEVAGHAGGSAAKQAPQP--FIEDATSPRP 78
+R GP P G A S AK +PQP ++E A+SPRP
Sbjct: 550 QRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP 594
>AK127591-1|BAC87047.1| 341|Homo sapiens protein ( Homo sapiens
cDNA FLJ45686 fis, clone FCBBF3012443. ).
Length = 341
Score = 29.9 bits (64), Expect = 5.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 299 QHLCC*LPASGSVWSMLP 246
QH CC LP G W+ LP
Sbjct: 35 QHCCCLLPKMGDTWAQLP 52
>AB015427-1|BAA90526.1| 722|Homo sapiens zinc finger protein 219
protein.
Length = 722
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 206 RRVSVGPVLGPLVARTEVAGHAGGSAAKQAPQP--FIEDATSPRP 78
+R GP P G A S AK +PQP ++E A+SPRP
Sbjct: 552 QRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP 596
>AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3052
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1804 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1847
>AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1882 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1925
>AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1882 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1925
>AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1882 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1925
>AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 2 protein.
Length = 3052
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1804 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1847
>AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 1 protein.
Length = 3052
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1804 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1847
>AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1882 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1925
>AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3052
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1804 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1847
>AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1882 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1925
>AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1882 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1925
>AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta protein.
Length = 3052
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 214 IKPPPRLSVYLGNIDQTLPEAGSQQQRCCQPSDVP-SPSSKGSR 342
+ PP R + +D L E Q+ C PSDVP P G R
Sbjct: 1804 MSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGR 1847
>BC038738-1|AAH38738.1| 64|Homo sapiens C12orf61 protein protein.
Length = 64
Score = 29.1 bits (62), Expect = 8.9
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1
Query: 194 VGPVLGPLVARTEVAGHAGGSAAKQAPQPFIEDATSPRP 78
VGP GPL A GH +AA A Q PRP
Sbjct: 1 VGPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRP 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,708,206
Number of Sequences: 237096
Number of extensions: 1826732
Number of successful extensions: 5476
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5463
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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