Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17h21
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY059456-1|AAL13362.1|  228|Drosophila melanogaster LD37206p pro...   163   1e-40
AE014134-1904|ABC65892.1|  228|Drosophila melanogaster CG6144-PB...   163   1e-40
AE014134-1903|AAF52964.3|  228|Drosophila melanogaster CG6144-PA...   163   1e-40
AE013599-3420|AAF46867.1|  615|Drosophila melanogaster CG17807-P...    44   2e-04
AY069858-1|AAL40003.1|  615|Drosophila melanogaster SD10403p pro...    44   2e-04
AE014134-1282|AAF52519.2|  450|Drosophila melanogaster CG13787-P...    31   1.8  
AY113285-1|AAM29290.1|  224|Drosophila melanogaster AT20140p pro...    28   9.9  
AE014134-2650|AAN10920.1|  312|Drosophila melanogaster CG31735-P...    28   9.9  
AE014134-2649|AAN10919.2|  362|Drosophila melanogaster CG31735-P...    28   9.9  

>AY059456-1|AAL13362.1|  228|Drosophila melanogaster LD37206p
           protein.
          Length = 228

 Score =  163 bits (397), Expect = 1e-40
 Identities = 74/124 (59%), Positives = 90/124 (72%)
 Frame = +3

Query: 243 VIKAEPTAYYISKFITEAEEQLILSNIYAAPKPKWTQLSNRRLQNWGGVPHNKGMIAETI 422
           V K  PT  YI  FIT  EEQ ILS+I   PKP+WTQL NRRL N+GGVPH  GMIAE I
Sbjct: 8   VRKCPPTVMYIPNFITSEEEQRILSHIERTPKPRWTQLLNRRLVNYGGVPHPNGMIAEEI 67

Query: 423 PTWLDLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGSHIVL 602
           P WL  Y+++++ L V   +  NHVLVNEY PGQGI+PH DG LF+P I+TIS G+H VL
Sbjct: 68  PEWLQTYVDKVNNLGVFESQNANHVLVNEYLPGQGILPHTDGPLFHPIISTISTGAHTVL 127

Query: 603 KFLE 614
           +F++
Sbjct: 128 EFVK 131


>AE014134-1904|ABC65892.1|  228|Drosophila melanogaster CG6144-PB,
           isoform B protein.
          Length = 228

 Score =  163 bits (397), Expect = 1e-40
 Identities = 74/124 (59%), Positives = 90/124 (72%)
 Frame = +3

Query: 243 VIKAEPTAYYISKFITEAEEQLILSNIYAAPKPKWTQLSNRRLQNWGGVPHNKGMIAETI 422
           V K  PT  YI  FIT  EEQ ILS+I   PKP+WTQL NRRL N+GGVPH  GMIAE I
Sbjct: 8   VRKCPPTVMYIPNFITSEEEQRILSHIERTPKPRWTQLLNRRLVNYGGVPHPNGMIAEEI 67

Query: 423 PTWLDLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGSHIVL 602
           P WL  Y+++++ L V   +  NHVLVNEY PGQGI+PH DG LF+P I+TIS G+H VL
Sbjct: 68  PEWLQTYVDKVNNLGVFESQNANHVLVNEYLPGQGILPHTDGPLFHPIISTISTGAHTVL 127

Query: 603 KFLE 614
           +F++
Sbjct: 128 EFVK 131


>AE014134-1903|AAF52964.3|  228|Drosophila melanogaster CG6144-PA,
           isoform A protein.
          Length = 228

 Score =  163 bits (397), Expect = 1e-40
 Identities = 74/124 (59%), Positives = 90/124 (72%)
 Frame = +3

Query: 243 VIKAEPTAYYISKFITEAEEQLILSNIYAAPKPKWTQLSNRRLQNWGGVPHNKGMIAETI 422
           V K  PT  YI  FIT  EEQ ILS+I   PKP+WTQL NRRL N+GGVPH  GMIAE I
Sbjct: 8   VRKCPPTVMYIPNFITSEEEQRILSHIERTPKPRWTQLLNRRLVNYGGVPHPNGMIAEEI 67

Query: 423 PTWLDLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGSHIVL 602
           P WL  Y+++++ L V   +  NHVLVNEY PGQGI+PH DG LF+P I+TIS G+H VL
Sbjct: 68  PEWLQTYVDKVNNLGVFESQNANHVLVNEYLPGQGILPHTDGPLFHPIISTISTGAHTVL 127

Query: 603 KFLE 614
           +F++
Sbjct: 128 EFVK 131


>AE013599-3420|AAF46867.1|  615|Drosophila melanogaster CG17807-PA
           protein.
          Length = 615

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
 Frame = +3

Query: 267 YYISKFITEAEEQLILSNIYAAPKPKWT--QLSNRRLQNWG--------GVPHNKGMIAE 416
           + I+ F+TE EE  +L  I    +       L +R ++++G         V  +K +  +
Sbjct: 138 HIIADFVTEEEESTLLRAIGEDGRTSEVTGSLKHRNVKHFGFEFLYGTNNVDPSKPL-EQ 196

Query: 417 TIPTWLDLYLERIHKL-NVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVGS 590
           +IP+  D+   R++   +      P+ + VNEY PG GI PH+D  + F   I ++S+ S
Sbjct: 197 SIPSACDILWPRLNSFASTWDWSSPDQLTVNEYEPGHGIPPHVDTHSAFLDPILSLSLQS 256

Query: 591 HIVLKF 608
            +V+ F
Sbjct: 257 DVVMDF 262


>AY069858-1|AAL40003.1|  615|Drosophila melanogaster SD10403p
           protein.
          Length = 615

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
 Frame = +3

Query: 267 YYISKFITEAEEQLILSNIYAAPKPK--WTQLSNRRLQNWG--------GVPHNKGMIAE 416
           + I+ F+TE EE  +L  I    +       L +R ++++G         V  +K +  +
Sbjct: 138 HIIADFVTEEEESTLLRAIGEDGRTSEGTGSLKHRNVKHFGFEFLYGTNNVDPSKPL-EQ 196

Query: 417 TIPTWLDLYLERIHKL-NVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVGS 590
           +IP+  D+   R++   +      P+ + VNEY PG GI PH+D  + F   I ++S+ S
Sbjct: 197 SIPSACDILWPRLNSFASTWDWSSPDQLTVNEYEPGHGIPPHVDTHSAFLDPILSLSLQS 256

Query: 591 HIVLKF 608
            +V+ F
Sbjct: 257 DVVMDF 262


>AE014134-1282|AAF52519.2|  450|Drosophila melanogaster CG13787-PA
           protein.
          Length = 450

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 284 EFTNVICSRFSLYY-YVIFNICYICHHYSLVFICTCSP*FL*F 159
           ++  ++ S F +    ++FN+ Y+C  YSL+   T SP F+ F
Sbjct: 135 DYRRILLSSFLISLGMLLFNVIYLCVSYSLLVSATISPSFVTF 177


>AY113285-1|AAM29290.1|  224|Drosophila melanogaster AT20140p
           protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 231 EDHIVIKAEPTAYYISKFITEAEE 302
           +DHIV+K  PT    S+ +TE EE
Sbjct: 100 DDHIVLKEVPTDLRYSEIVTEYEE 123


>AE014134-2650|AAN10920.1|  312|Drosophila melanogaster CG31735-PA,
           isoform A protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 231 EDHIVIKAEPTAYYISKFITEAEE 302
           +DHIV+K  PT    S+ +TE EE
Sbjct: 188 DDHIVLKEVPTDLRYSEIVTEYEE 211


>AE014134-2649|AAN10919.2|  362|Drosophila melanogaster CG31735-PB,
           isoform B protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 231 EDHIVIKAEPTAYYISKFITEAEE 302
           +DHIV+K  PT    S+ +TE EE
Sbjct: 238 DDHIVLKEVPTDLRYSEIVTEYEE 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,290,634
Number of Sequences: 53049
Number of extensions: 618902
Number of successful extensions: 1274
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)