Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17h19
(624 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122133-1|AAM52645.1| 393|Drosophila melanogaster GH25655p pro... 161 9e-40
AE013599-891|AAF58918.3| 393|Drosophila melanogaster CG1827-PA,... 161 9e-40
BT011404-1|AAR96196.1| 336|Drosophila melanogaster AT24323p pro... 157 1e-38
AE013599-892|AAM71075.1| 336|Drosophila melanogaster CG1827-PB,... 157 1e-38
AE013599-2849|AAF57585.1| 341|Drosophila melanogaster CG10474-P... 135 4e-32
AE013599-3287|AAF46769.2| 397|Drosophila melanogaster CG4372-PA... 110 1e-24
AY061292-1|AAL28840.1| 332|Drosophila melanogaster LD20519p pro... 65 8e-11
AE014298-2171|AAF48471.1| 332|Drosophila melanogaster CG7860-PA... 65 8e-11
AY061074-1|AAL28622.1| 365|Drosophila melanogaster LD05057p pro... 61 1e-09
AE014296-2628|AAF49544.2| 365|Drosophila melanogaster CG5241-PA... 61 1e-09
BT001727-1|AAN71482.1| 1019|Drosophila melanogaster RE69909p pro... 29 3.9
AE014297-2958|AAF55867.1| 1019|Drosophila melanogaster CG5871-PA... 29 3.9
>AY122133-1|AAM52645.1| 393|Drosophila melanogaster GH25655p
protein.
Length = 393
Score = 161 bits (390), Expect = 9e-40
Identities = 78/131 (59%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = +1
Query: 187 IPIVITTWSFTNSTVKAWEVL--NNGGT--ALDAVEQGASVCEDQQCDGTVGYGGSPDEN 354
+P+VI TW+FT + V AW +L + GG +AV +G S CE QCD TVGYGGSPDE
Sbjct: 56 LPMVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGSPDEL 115
Query: 355 GETTLDALIMNGRTMNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQ 534
GETTLDA++M+G TM++GAV GLRRIK AI VARHVL+HT+H+ LVG+ A+ FA MGF+
Sbjct: 116 GETTLDAMVMDGATMDVGAVAGLRRIKDAIKVARHVLEHTQHTMLVGDAASAFANAMGFE 175
Query: 535 EESLTTSVSKN 567
ESL T SK+
Sbjct: 176 SESLVTPESKD 186
>AE013599-891|AAF58918.3| 393|Drosophila melanogaster CG1827-PA,
isoform A protein.
Length = 393
Score = 161 bits (390), Expect = 9e-40
Identities = 78/131 (59%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = +1
Query: 187 IPIVITTWSFTNSTVKAWEVL--NNGGT--ALDAVEQGASVCEDQQCDGTVGYGGSPDEN 354
+P+VI TW+FT + V AW +L + GG +AV +G S CE QCD TVGYGGSPDE
Sbjct: 56 LPMVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGSPDEL 115
Query: 355 GETTLDALIMNGRTMNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQ 534
GETTLDA++M+G TM++GAV GLRRIK AI VARHVL+HT+H+ LVG+ A+ FA MGF+
Sbjct: 116 GETTLDAMVMDGATMDVGAVAGLRRIKDAIKVARHVLEHTQHTMLVGDAASAFANAMGFE 175
Query: 535 EESLTTSVSKN 567
ESL T SK+
Sbjct: 176 SESLVTPESKD 186
>BT011404-1|AAR96196.1| 336|Drosophila melanogaster AT24323p
protein.
Length = 336
Score = 157 bits (381), Expect = 1e-38
Identities = 77/129 (59%), Positives = 96/129 (74%), Gaps = 4/129 (3%)
Frame = +1
Query: 193 IVITTWSFTNSTVKAWEVL--NNGGT--ALDAVEQGASVCEDQQCDGTVGYGGSPDENGE 360
+VI TW+FT + V AW +L + GG +AV +G S CE QCD TVGYGGSPDE GE
Sbjct: 1 MVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGSPDELGE 60
Query: 361 TTLDALIMNGRTMNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQEE 540
TTLDA++M+G TM++GAV GLRRIK AI VARHVL+HT+H+ LVG+ A+ FA MGF+ E
Sbjct: 61 TTLDAMVMDGATMDVGAVAGLRRIKDAIKVARHVLEHTQHTMLVGDAASAFANAMGFESE 120
Query: 541 SLTTSVSKN 567
SL T SK+
Sbjct: 121 SLVTPESKD 129
>AE013599-892|AAM71075.1| 336|Drosophila melanogaster CG1827-PB,
isoform B protein.
Length = 336
Score = 157 bits (381), Expect = 1e-38
Identities = 77/129 (59%), Positives = 96/129 (74%), Gaps = 4/129 (3%)
Frame = +1
Query: 193 IVITTWSFTNSTVKAWEVL--NNGGT--ALDAVEQGASVCEDQQCDGTVGYGGSPDENGE 360
+VI TW+FT + V AW +L + GG +AV +G S CE QCD TVGYGGSPDE GE
Sbjct: 1 MVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGSPDELGE 60
Query: 361 TTLDALIMNGRTMNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQEE 540
TTLDA++M+G TM++GAV GLRRIK AI VARHVL+HT+H+ LVG+ A+ FA MGF+ E
Sbjct: 61 TTLDAMVMDGATMDVGAVAGLRRIKDAIKVARHVLEHTQHTMLVGDAASAFANAMGFESE 120
Query: 541 SLTTSVSKN 567
SL T SK+
Sbjct: 121 SLVTPESKD 129
>AE013599-2849|AAF57585.1| 341|Drosophila melanogaster CG10474-PA
protein.
Length = 341
Score = 135 bits (327), Expect = 4e-32
Identities = 68/124 (54%), Positives = 86/124 (69%), Gaps = 4/124 (3%)
Frame = +1
Query: 193 IVITTWSFTNSTVKAWEVLN---NG-GTALDAVEQGASVCEDQQCDGTVGYGGSPDENGE 360
+VI TW F + +AW +LN G G AV G S+CE QC TVGYGG+PDE G+
Sbjct: 1 MVINTWPFAEAKKEAWRLLNVKKGGLGQTRSAVVGGISMCEKLQCAKTVGYGGNPDERGD 60
Query: 361 TTLDALIMNGRTMNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQEE 540
T+LDAL+M+G TM +GAVG LRRI+ AI VA+HVL+HT H+ LVG+ A +FA MG Q E
Sbjct: 61 TSLDALLMDGGTMEVGAVGDLRRIRSAIKVAQHVLEHTLHTLLVGDGADEFANAMGLQYE 120
Query: 541 SLTT 552
SL +
Sbjct: 121 SLNS 124
>AE013599-3287|AAF46769.2| 397|Drosophila melanogaster CG4372-PA
protein.
Length = 397
Score = 110 bits (265), Expect = 1e-24
Identities = 53/126 (42%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
Frame = +1
Query: 193 IVITTWSFTNSTVKAWEVLNNGGTAL-DAVEQGASVCEDQQCDGTVGYGGSPDENGETTL 369
++I+TW++T++ ++AW VL G AV QG C++Q+C + SPD G TL
Sbjct: 54 LLISTWNYTDANLQAWSVLQQGPRRTRQAVIQGCMACQNQRCGRLLTGRSSPDTEGALTL 113
Query: 370 DALIMNGRTMNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQEESLT 549
+A IM+G ++ GAV G+ +++AI VA VL +TKHS LVG+ AT+FA +G++EE LT
Sbjct: 114 EAAIMDGESLEYGAVAGMNGVRNAILVADAVLKYTKHSVLVGKSATKFARSLGYKEEYLT 173
Query: 550 TSVSKN 567
+ ++N
Sbjct: 174 DARTRN 179
>AY061292-1|AAL28840.1| 332|Drosophila melanogaster LD20519p
protein.
Length = 332
Score = 64.9 bits (151), Expect = 8e-11
Identities = 33/93 (35%), Positives = 53/93 (56%)
Frame = +1
Query: 250 NNGGTALDAVEQGASVCEDQQCDGTVGYGGSPDENGETTLDALIMNGRTMNIGAVGGLRR 429
+ GG+ALDAVE E + + GYG + +G+ L+A +M GR + G + LR
Sbjct: 44 SGGGSALDAVEAAVRSMELDE-NFNAGYGSCLNTSGQVELEASLMEGRDLRAGCITLLRD 102
Query: 430 IKHAISVARHVLDHTKHSFLVGELATQFAVEMG 528
+ H I+VAR +++ +H+FL G A + A+ G
Sbjct: 103 VMHPITVARRLMEKQRHTFLGGAAAQELALATG 135
>AE014298-2171|AAF48471.1| 332|Drosophila melanogaster CG7860-PA
protein.
Length = 332
Score = 64.9 bits (151), Expect = 8e-11
Identities = 33/93 (35%), Positives = 53/93 (56%)
Frame = +1
Query: 250 NNGGTALDAVEQGASVCEDQQCDGTVGYGGSPDENGETTLDALIMNGRTMNIGAVGGLRR 429
+ GG+ALDAVE E + + GYG + +G+ L+A +M GR + G + LR
Sbjct: 44 SGGGSALDAVEAAVRSMELDE-NFNAGYGSCLNTSGQVELEASLMEGRDLRAGCITLLRD 102
Query: 430 IKHAISVARHVLDHTKHSFLVGELATQFAVEMG 528
+ H I+VAR +++ +H+FL G A + A+ G
Sbjct: 103 VMHPITVARRLMEKQRHTFLGGAAAQELALATG 135
>AY061074-1|AAL28622.1| 365|Drosophila melanogaster LD05057p
protein.
Length = 365
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 229 VKAWEVLNNGGTALDAVEQGASVCEDQQCDGT-VGYGGSPDENGETTLDALIMNGRTMNI 405
++A E+L NGG+A+DA E A++ + C T GYG + +G DA IM+G T+N
Sbjct: 29 LRATEILRNGGSAVDACE--AAIVRLENCGYTNAGYGSNLCMDGSVQCDAAIMDGSTLNF 86
Query: 406 GAVGGLRRIKHAISVARHVLD 468
GA + R+K+ I +AR + D
Sbjct: 87 GACTNVSRVKNPIQLARRICD 107
>AE014296-2628|AAF49544.2| 365|Drosophila melanogaster CG5241-PA
protein.
Length = 365
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 229 VKAWEVLNNGGTALDAVEQGASVCEDQQCDGT-VGYGGSPDENGETTLDALIMNGRTMNI 405
++A E+L NGG+A+DA E A++ + C T GYG + +G DA IM+G T+N
Sbjct: 29 LRATEILRNGGSAVDACE--AAIVRLENCGYTNAGYGSNLCMDGSVQCDAAIMDGSTLNF 86
Query: 406 GAVGGLRRIKHAISVARHVLD 468
GA + R+K+ I +AR + D
Sbjct: 87 GACTNVSRVKNPIQLARRICD 107
>BT001727-1|AAN71482.1| 1019|Drosophila melanogaster RE69909p
protein.
Length = 1019
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -2
Query: 341 LPPYPTVPS--HCWSSQTDAPCSTASNAVPPLFRTSQALTVEFVNDQVVITMGI 186
+P P +PS C S T ST+S VPP T+Q ++ + D V+T +
Sbjct: 363 MPIIPIIPSINTCMSLTTTTTTSTSSRTVPPTVNTTQ---LQALADVCVVTSSL 413
>AE014297-2958|AAF55867.1| 1019|Drosophila melanogaster CG5871-PA
protein.
Length = 1019
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -2
Query: 341 LPPYPTVPS--HCWSSQTDAPCSTASNAVPPLFRTSQALTVEFVNDQVVITMGI 186
+P P +PS C S T ST+S VPP T+Q ++ + D V+T +
Sbjct: 363 MPIIPIIPSINTCMSLTTTTTTSTSSRTVPPTVNTTQ---LQALADVCVVTSSL 413
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,636,517
Number of Sequences: 53049
Number of extensions: 597727
Number of successful extensions: 1884
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1874
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -