Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17h17
(519 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB065801-1|BAC06020.1| 308|Homo sapiens seven transmembrane hel... 30 5.6
Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for ... 29 7.4
X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit p... 29 7.4
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 29 7.4
M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein. 29 7.4
BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein. 29 7.4
BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein. 29 7.4
AY653037-1|AAT74745.1| 162|Homo sapiens proteoglycan 4 protein. 29 7.4
AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion g... 29 7.4
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 29 7.4
AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, be... 29 7.4
AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens ... 29 7.4
AJ628243-1|CAF31636.1| 38|Homo sapiens keratin associated prot... 29 7.4
AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated prot... 29 7.4
AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated prot... 29 7.4
BC133035-1|AAI33036.1| 129|Homo sapiens keratin associated prot... 29 9.8
BC130399-1|AAI30400.1| 129|Homo sapiens keratin associated prot... 29 9.8
AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein. 29 9.8
AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein p... 29 9.8
AK128489-1|BAC87461.1| 206|Homo sapiens protein ( Homo sapiens ... 29 9.8
AJ628246-1|CAF31638.1| 167|Homo sapiens keratin associated prot... 29 9.8
AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer kerat... 29 9.8
AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated prot... 29 9.8
AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated prot... 29 9.8
AB126075-1|BAD20202.1| 129|Homo sapiens keratin associated prot... 29 9.8
AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated prot... 29 9.8
AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated prot... 29 9.8
>AB065801-1|BAC06020.1| 308|Homo sapiens seven transmembrane helix
receptor protein.
Length = 308
Score = 29.9 bits (64), Expect = 5.6
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 183 VQFLVELQGDGHPLQPPRIAD-ITVCNLLIASMRSHILDLFCTVNFLYFEILSFV 22
V F++ L GH + P + + + L AS+R +I+ C ++ L F+I++ V
Sbjct: 159 VLFILRLPFCGHQIIPHTYGEHMGIARLSCASIRVNIIYGLCAISILVFDIIAIV 213
>Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for
beta-subunit of cell surface adhesion glycoproteins
LFA-1, CR3 and p150,95. ).
Length = 761
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 607 CPGCPSPCGKYISCAEC 623
>X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit
protein.
Length = 769
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 YKLLCPQFEAVAADAHRPVTPP 173
Y CP +E+ A+ H P +PP
Sbjct: 93 YDKCCPDYESFCAEVHNPTSPP 114
>M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein.
Length = 769
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein.
Length = 758
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 604 CPGCPSPCGKYISCAEC 620
>BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein.
Length = 769
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>AY653037-1|AAT74745.1| 162|Homo sapiens proteoglycan 4 protein.
Length = 162
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 YKLLCPQFEAVAADAHRPVTPP 173
Y CP +E+ A+ H P +PP
Sbjct: 62 YDKCCPDYESFCAEVHNPTSPP 83
>AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion
glycoprotein (LFA-1/CR3/P150,959 beta subunit precursor)
protein.
Length = 769
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 YKLLCPQFEAVAADAHRPVTPP 173
Y CP +E+ A+ H P +PP
Sbjct: 93 YDKCCPDYESFCAEVHNPTSPP 114
>AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, beta
2 precursor variant protein.
Length = 769
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens
cDNA FLJ16561 fis, clone SYNOV4003981, moderately
similar to Homo sapiens proteoglycan 4, (megakaryocyte
stimulating ).
Length = 933
Score = 29.5 bits (63), Expect = 7.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 YKLLCPQFEAVAADAHRPVTPP 173
Y CP +E+ A+ H P +PP
Sbjct: 52 YDKCCPDYESFCAEVHNPTSPP 73
>AJ628243-1|CAF31636.1| 38|Homo sapiens keratin associated protein
5-3 protein.
Length = 38
Score = 29.5 bits (63), Expect = 7.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 7 SGCGSSCCQSSCCNPCCSQSS 27
>AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated protein
protein.
Length = 165
Score = 29.5 bits (63), Expect = 7.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 134 SGCGSSCCQSSCCNPCCSQSS 154
>AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated protein
protein.
Length = 288
Score = 29.5 bits (63), Expect = 7.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 257 SGCGSSCCQSSCCNPCCSQSS 277
>BC133035-1|AAI33036.1| 129|Homo sapiens keratin associated protein
5-6 protein.
Length = 129
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 98 SGCGSSCCQSSCCKPCCSQAS 118
>BC130399-1|AAI30400.1| 129|Homo sapiens keratin associated protein
5-6 protein.
Length = 129
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 98 SGCGSSCCQSSCCKPCCSQAS 118
>AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein.
Length = 238
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 178 SGCGSSCCQSSCCKPCCSQSS 198
>AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein
protein.
Length = 187
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 98 SGCGSSCCQSSCCKPCCSQSS 118
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 127 SGCGSSCCQSSCCKPCCSQSS 147
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 156 SGCGSSCCQSSCCKPCCSQSS 176
>AK128489-1|BAC87461.1| 206|Homo sapiens protein ( Homo sapiens
cDNA FLJ46637 fis, clone TRACH3002293. ).
Length = 206
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 189 HGVQFLVELQGDGHPLQPPRIADITVCNLLIASMRSHILDL 67
H L + G P P R +T C LL+ RSHI L
Sbjct: 25 HAKVLLGAIASAGQPASPLREVSLTHCPLLLGPSRSHIQGL 65
>AJ628246-1|CAF31638.1| 167|Homo sapiens keratin associated protein
5-9 protein.
Length = 167
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 107 SGCGSSCCQSSCCKPCCSQSS 127
>AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer keratin
protein.
Length = 194
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 105 SGCGSSCCQSSCCKPCCSQSS 125
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 134 SGCGSSCCQSSCCKPCCSQSS 154
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 163 SGCGSSCCQSSCCKPCCSQSS 183
>AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated protein
protein.
Length = 156
Score = 29.1 bits (62), Expect = 9.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 131 RGGCSGCPSPCNSTRNCTPCCS 196
+GGC C C+ + C PCCS
Sbjct: 74 KGGCGSCG--CSQSNCCKPCCS 93
>AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated protein
protein.
Length = 187
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 98 SGCGSSCCQSSCCKPCCSQSS 118
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 127 SGCGSSCCQSSCCKPCCSQSS 147
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 156 SGCGSSCCQSSCCKPCCSQSS 176
>AB126075-1|BAD20202.1| 129|Homo sapiens keratin associated protein
protein.
Length = 129
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 98 SGCGSSCCQSSCCKPCCSQAS 118
>AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated protein
protein.
Length = 238
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 178 SGCGSSCCQSSCCKPCCSQSS 198
>AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated protein
protein.
Length = 278
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 247 SGCGSSCCQSSCCKPCCSQSS 267
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,090,728
Number of Sequences: 237096
Number of extensions: 1310857
Number of successful extensions: 3397
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3392
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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