Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17h09
         (311 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF011624-1|ABK41114.1|  626|Homo sapiens CDW14/WDR76 protein.          27   8.8  
BC051855-1|AAH51855.1|  626|Homo sapiens WD repeat domain 76 pro...    27   8.8  
AK023035-1|BAB14369.1|  626|Homo sapiens protein ( Homo sapiens ...    27   8.8  

>EF011624-1|ABK41114.1|  626|Homo sapiens CDW14/WDR76 protein.
          Length = 626

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 95  TSIIFGAGVYTGVYVAQNYQIEKVEDPKALFEK 193
           T +I  A VY   +   NYQ++++  PK+L EK
Sbjct: 41  TVLIKTAKVYLAPFSLSNYQLDQLMCPKSLSEK 73


>BC051855-1|AAH51855.1|  626|Homo sapiens WD repeat domain 76
           protein.
          Length = 626

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 95  TSIIFGAGVYTGVYVAQNYQIEKVEDPKALFEK 193
           T +I  A VY   +   NYQ++++  PK+L EK
Sbjct: 41  TVLIKTAKVYLAPFSLSNYQLDQLMCPKSLSEK 73


>AK023035-1|BAB14369.1|  626|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12973 fis, clone NT2RP2006023. ).
          Length = 626

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 95  TSIIFGAGVYTGVYVAQNYQIEKVEDPKALFEK 193
           T +I  A VY   +   NYQ++++  PK+L EK
Sbjct: 41  TVLIKTAKVYLAPFSLSNYQLDQLMCPKSLSEK 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,716,782
Number of Sequences: 237096
Number of extensions: 466638
Number of successful extensions: 1162
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)