Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17h08
(599 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF110334-1|AAD28183.1| 1246|Homo sapiens APC2 protein protein. 30 7.1
Y00649-1|CAA68674.1| 1032|Homo sapiens CR2 receptor protein. 29 9.4
M26016-1|AAB04638.1| 1033|Homo sapiens CR2 protein. 29 9.4
M26004-1|AAA35786.1| 1033|Homo sapiens CR2 protein. 29 9.4
J03565-1|AAA35784.1| 1087|Homo sapiens CR2 protein. 29 9.4
EF064746-1|ABK41929.1| 1092|Homo sapiens complement component (3... 29 9.4
BC126449-1|AAI26450.1| 360|Homo sapiens LSM11, U7 small nuclear... 29 9.4
BC090937-1|AAH90937.1| 1033|Homo sapiens complement component (3... 29 9.4
BC051353-1|AAH51353.1| 353|Homo sapiens LSM11 protein protein. 29 9.4
AL691452-9|CAI16729.1| 1092|Homo sapiens complement component (3... 29 9.4
AL691452-8|CAI16731.1| 971|Homo sapiens complement component (3... 29 9.4
AL691452-7|CAI16730.1| 1033|Homo sapiens complement component (3... 29 9.4
AL391597-7|CAH72950.1| 1092|Homo sapiens complement component (3... 29 9.4
AL391597-6|CAH72951.1| 971|Homo sapiens complement component (3... 29 9.4
AL391597-5|CAH72949.1| 1033|Homo sapiens complement component (3... 29 9.4
AK223627-1|BAD97347.1| 1092|Homo sapiens complement component (3... 29 9.4
AK095592-1|BAC04581.1| 360|Homo sapiens protein ( Homo sapiens ... 29 9.4
>AF110334-1|AAD28183.1| 1246|Homo sapiens APC2 protein protein.
Length = 1246
Score = 29.9 bits (64), Expect = 7.1
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 CEGHHSGAKSSLPLVCLVPRDGASSEARTKP-RPASAGPTTQNDFQLLDEEYIRK 329
C GH SG S L + S ++T P PA GP F L E Y+++
Sbjct: 910 CSGHGSGTISPSELPDSPGQTMPPSRSKTPPLAPAPQGPPEATQFSLQWESYVKR 964
>Y00649-1|CAA68674.1| 1032|Homo sapiens CR2 receptor protein.
Length = 1032
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 558 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 613
>M26016-1|AAB04638.1| 1033|Homo sapiens CR2 protein.
Length = 1033
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>M26004-1|AAA35786.1| 1033|Homo sapiens CR2 protein.
Length = 1033
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>J03565-1|AAA35784.1| 1087|Homo sapiens CR2 protein.
Length = 1087
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>EF064746-1|ABK41929.1| 1092|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1092
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>BC126449-1|AAI26450.1| 360|Homo sapiens LSM11, U7 small nuclear
RNA associated protein.
Length = 360
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 319 YSSSSNWKSF*VVGPADAGRGFVLASEDAPS 227
YS +S WK V G AD GRG S PS
Sbjct: 253 YSQTSTWKLASVWGRADTGRGSHKRSRSVPS 283
>BC090937-1|AAH90937.1| 1033|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1033
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>BC051353-1|AAH51353.1| 353|Homo sapiens LSM11 protein protein.
Length = 353
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 319 YSSSSNWKSF*VVGPADAGRGFVLASEDAPS 227
YS +S WK V G AD GRG S PS
Sbjct: 246 YSQTSTWKLASVWGRADTGRGSHKRSRSVPS 276
>AL691452-9|CAI16729.1| 1092|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1092
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>AL691452-8|CAI16731.1| 971|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 971
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>AL691452-7|CAI16730.1| 1033|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1033
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>AL391597-7|CAH72950.1| 1092|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1092
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>AL391597-6|CAH72951.1| 971|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 971
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>AL391597-5|CAH72949.1| 1033|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1033
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>AK223627-1|BAD97347.1| 1092|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 isoform 1 variant
protein.
Length = 1092
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKIN 449
GP +F L+ E IR +R + P PL + C H ++A YKI+
Sbjct: 559 GPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKIS 614
>AK095592-1|BAC04581.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ38273 fis, clone FCBBF3003305. ).
Length = 360
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 319 YSSSSNWKSF*VVGPADAGRGFVLASEDAPS 227
YS +S WK V G AD GRG S PS
Sbjct: 253 YSQTSTWKLASVWGRADTGRGSHKRSRSVPS 283
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,486,369
Number of Sequences: 237096
Number of extensions: 2024382
Number of successful extensions: 9063
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9063
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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