SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17h07
         (509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    23   1.8  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   1.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   2.4  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   3.2  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   3.2  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   3.2  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   3.2  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   3.2  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   3.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   3.2  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    22   3.2  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   5.6  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   5.6  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   7.4  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    21   7.4  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    21   7.4  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    21   7.4  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    21   7.4  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    21   7.4  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    21   7.4  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   7.4  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.8  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.8  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.8  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.8  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   9.8  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    21   9.8  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   9.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   9.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   9.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   9.8  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   9.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.8  

>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ PL+    ++PP+ Y    PL
Sbjct: 146 RHIGPLTPFPRFIPPNAYRFRPPL 169


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ PL+    ++PP+ Y    PL
Sbjct: 387 RHIGPLTPFPRFIPPNAYRFRPPL 410


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 246 VGFRDLCDMFDYNCI 290
           +G RDLCD+  YN +
Sbjct: 304 IGSRDLCDVQRYNLL 318



 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 238  EMSSASEIYATCSIITALDVEITDKQ 315
            + + A ++Y T   I     E+TDKQ
Sbjct: 1074 DCTMAEDVYQTLKHIIQTHGEMTDKQ 1099


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 400 FFLNIFSYVYLLLTRV 447
           FF+ IF+Y+ +L+T V
Sbjct: 413 FFIVIFTYIIILITLV 428


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y L  PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y L  PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y L  PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y L  PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y L  PL
Sbjct: 142 RHIGPSTLFPRFIPPNAYRLRPPL 165


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y L  PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 288 CSYNRTCRIDL*SRRHLQ 235
           C Y   C ID+  RR  Q
Sbjct: 223 CKYGNNCEIDMYMRRKCQ 240



 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 246 VGFRDLCDMFDYNCIRRRNYRQTACPEDK 332
           VG R  C + +Y C  +R   +    +DK
Sbjct: 250 VGMRPECVVPEYQCAVKRKEEKAQKEKDK 278


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 288 CSYNRTCRIDL*SRRHLQ 235
           C Y   C ID+  RR  Q
Sbjct: 20  CKYGNNCEIDMYMRRKCQ 37


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 200 PRPRPDLRYQSRWRCR 247
           P P PD+ Y+ R R R
Sbjct: 197 PEPYPDITYEIRLRRR 212


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P ++   ++PP+ Y    PL
Sbjct: 376 RHIGPSTSFPRFIPPNAYRFRPPL 399


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 151 RHIGPSTPFPQFIPPNAYKFRPPL 174


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 154 RHIGPSTPFPRFIPPNAYKFRPPL 177


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 153 RHIGPSTPFPRFIPPNAYRFRPPL 176


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 153 RHIGPSTPFPRFIPPNAYRFRPPL 176


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 153 RHIGPSTPFPRFIPPNAYRFRPPL 176


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 153 RHIGPSTPFPRFIPPNAYRFRPPL 176


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 145 RHIGPSTPFPRFIPPNAYRFRPPL 168


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYRFRPPL 174


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 148 RHIGPSTPFPRFIPPNAYRFRPPL 171


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 148 RHIGPSTPFPRFIPPNAYRFRPPL 171


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 148 RHIGPSTPFPRFIPPNAYRFRPPL 171


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 148 RHIGPSTPFPRFIPPNAYRFRPPL 171


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 188 RHVAPLSTHFFYLPPHRYVLIIPL 117
           RH+ P +    ++PP+ Y    PL
Sbjct: 393 RHIGPSTPFPRFIPPNAYRFRPPL 416


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 FRDLCDMFDYNCIRRRNYRQTACPEDK 332
           F+D  D FDY+ + +   +   C ++K
Sbjct: 493 FKDKSDWFDYSEVSKWVQKGQICLKEK 519


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,249
Number of Sequences: 438
Number of extensions: 2765
Number of successful extensions: 36
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -