Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17g20
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125067-1|BAC86039.1|  651|Homo sapiens protein ( Homo sapiens ...    34   0.37 
D31886-1|BAA06684.1|  981|Homo sapiens KIAA0066 protein.               31   3.4  
BC146809-1|AAI46810.1|  935|Homo sapiens RAB3GAP1 protein protein.     31   3.4  
BC022977-1|AAH22977.1|  543|Homo sapiens RAB3GAP1 protein protein.     31   3.4  

>AK125067-1|BAC86039.1|  651|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43077 fis, clone BRTHA3015910. ).
          Length = 651

 Score = 34.3 bits (75), Expect = 0.37
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +3

Query: 420 RRDNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIPKT-TKIERAKAMNNEKKSKFKS 596
           R + +  +S V+N +     STQ P P   +  E ++ KT  ++ + K   N K++K K 
Sbjct: 4   RYEYQMSISIVMNSVEPSHKSTQRPPPPQGRQRERVLKKTGHRLSKTKQKRNRKRNK-KQ 62

Query: 597 KILNRNYDDN 626
              NR  ++N
Sbjct: 63  NSQNRIMEEN 72


>D31886-1|BAA06684.1|  981|Homo sapiens KIAA0066 protein.
          Length = 981

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 31/115 (26%), Positives = 48/115 (41%)
 Frame = +3

Query: 246  RQRRKVFTSRRETSRRRHKETQDSQKTQTFRKHIDFLKFDLIFSVTKRLKTLPNQITRRR 425
            R++R++F   RE  +  H      QK     +H+            K  ++L N  + ++
Sbjct: 749  RRQRRLFDDTREAEKVLHYLA--IQKPADLARHLLPCVIHAAVLKVKEEESLENISSVKK 806

Query: 426  DNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIPKTTKIERAKAMNNEKKSKF 590
              KQ +S    +L        FP P  DK  EEII + T +E   A     K+KF
Sbjct: 807  IIKQIISHSSKVL-------HFPNPE-DKKLEEIIHQITNVEALIARARSLKAKF 853


>BC146809-1|AAI46810.1|  935|Homo sapiens RAB3GAP1 protein protein.
          Length = 935

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 31/115 (26%), Positives = 48/115 (41%)
 Frame = +3

Query: 246  RQRRKVFTSRRETSRRRHKETQDSQKTQTFRKHIDFLKFDLIFSVTKRLKTLPNQITRRR 425
            R++R++F   RE  +  H      QK     +H+            K  ++L N  + ++
Sbjct: 705  RRQRRLFDDTREAEKVLHYLA--IQKPADLARHLLPCVIHAAVLKVKEEESLENISSVKK 762

Query: 426  DNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIPKTTKIERAKAMNNEKKSKF 590
              KQ +S    +L        FP P  DK  EEII + T +E   A     K+KF
Sbjct: 763  IIKQIISHSSKVL-------HFPNPE-DKKLEEIIHQITNVEALIARARSLKAKF 809


>BC022977-1|AAH22977.1|  543|Homo sapiens RAB3GAP1 protein protein.
          Length = 543

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 31/115 (26%), Positives = 48/115 (41%)
 Frame = +3

Query: 246 RQRRKVFTSRRETSRRRHKETQDSQKTQTFRKHIDFLKFDLIFSVTKRLKTLPNQITRRR 425
           R++R++F   RE  +  H      QK     +H+            K  ++L N  + ++
Sbjct: 311 RRQRRLFDDTREAEKVLHYLA--IQKPADLARHLLPCVIHAAVLKVKEEESLENISSVKK 368

Query: 426 DNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIPKTTKIERAKAMNNEKKSKF 590
             KQ +S    +L        FP P  DK  EEII + T +E   A     K+KF
Sbjct: 369 IIKQIISHSSKVL-------HFPNPE-DKKLEEIIHQITNVEALIARARSLKAKF 415


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,405,042
Number of Sequences: 237096
Number of extensions: 1123166
Number of successful extensions: 3356
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3349
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)