Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17f21
         (308 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M21154-1|AAA51716.1|  334|Homo sapiens AMD2 protein.                   30   1.6  
BC000171-1|AAH00171.1|  334|Homo sapiens adenosylmethionine deca...    30   1.6  
AL365206-1|CAI23233.1|  334|Homo sapiens adenosylmethionine deca...    30   1.6  
AL357515-1|CAH73388.1|  334|Homo sapiens adenosylmethionine deca...    30   1.6  
BC073937-1|AAH73937.1|  238|Homo sapiens IGKC protein protein.         29   3.7  
AF408727-1|AAL04525.1|   92|Homo sapiens anti-pneumococcal capsu...    27   8.5  

>M21154-1|AAA51716.1|  334|Homo sapiens AMD2 protein.
          Length = 334

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +2

Query: 263 FFEGXEKLIEIWFT 304
           FFEG EKL+E+WF+
Sbjct: 6   FFEGTEKLLEVWFS 19


>BC000171-1|AAH00171.1|  334|Homo sapiens adenosylmethionine
           decarboxylase 1 protein.
          Length = 334

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +2

Query: 263 FFEGXEKLIEIWFT 304
           FFEG EKL+E+WF+
Sbjct: 6   FFEGTEKLLEVWFS 19


>AL365206-1|CAI23233.1|  334|Homo sapiens adenosylmethionine
           decarboxylase 1 protein.
          Length = 334

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +2

Query: 263 FFEGXEKLIEIWFT 304
           FFEG EKL+E+WF+
Sbjct: 6   FFEGTEKLLEVWFS 19


>AL357515-1|CAH73388.1|  334|Homo sapiens adenosylmethionine
           decarboxylase 1 protein.
          Length = 334

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +2

Query: 263 FFEGXEKLIEIWFT 304
           FFEG EKL+E+WF+
Sbjct: 6   FFEGTEKLLEVWFS 19


>BC073937-1|AAH73937.1|  238|Homo sapiens IGKC protein protein.
          Length = 238

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +1

Query: 16  NVTCAGSLALLERDGDSYLHYSFRP 90
           +++C  SL+L+  DG++YL++  RP
Sbjct: 40  SISCRSSLSLVHSDGNTYLNWFQRP 64


>AF408727-1|AAL04525.1|   92|Homo sapiens anti-pneumococcal
          capsular polysaccharide immunoglobulin light chain
          variable r protein.
          Length = 92

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +1

Query: 16 NVTCAGSLALLERDGDSYLHY 78
          +++C  S +L+  DGD+YLH+
Sbjct: 19 SISCRSSQSLVYSDGDTYLHW 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,992,317
Number of Sequences: 237096
Number of extensions: 608120
Number of successful extensions: 5047
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5047
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)