Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17f13
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0475 + 18182412-18183270,18183384-18183880                       29   2.3  
12_02_0521 - 19955475-19956076,19957146-19958403                       29   3.1  

>10_08_0475 + 18182412-18183270,18183384-18183880
          Length = 451

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +1

Query: 340 RFGVMVQTCVKEMDPFDAVLVMRLHTKKKEIMVVPDPSFNIIVLQQARQKIKKNS 504
           R+ V+V   +  + PF AVL+   H+KK  ++ +          +QA +K+   S
Sbjct: 251 RWSVVVIALIAALVPFAAVLIFLHHSKKSRVVRLGGGDIKDKAAEQAGKKVSSGS 305


>12_02_0521 - 19955475-19956076,19957146-19958403
          Length = 619

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 324 RLGSAQIRCYGTNLRQGNGSFRRSTSNAFAYEKERNHGGPGSVL 455
           ++GS +++  G+N  QG+ S   S S+   +  E NHG   +V+
Sbjct: 54  QVGSPEMQEPGSNSDQGHDSATESASSRETWPAEPNHGSAAAVV 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,160,871
Number of Sequences: 37544
Number of extensions: 299033
Number of successful extensions: 684
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)