Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17f06
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 59 5e-10
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 42 1e-04
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 40 3e-04
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 38 0.001
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 37 0.002
SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D |Schi... 29 0.62
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 27 1.9
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 27 3.3
SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD subfamily|Sch... 27 3.3
SPAC4A8.04 |isp6|prb1|vacuolar serine protease Isp6|Schizosaccha... 26 4.4
SPBC776.06c |||spindle pole body interacting protein |Schizosacc... 26 4.4
SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein 2|S... 26 5.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 5.8
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 25 7.7
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 25 7.7
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 59.3 bits (137), Expect = 5e-10
Identities = 45/159 (28%), Positives = 76/159 (47%)
Frame = +1
Query: 181 MAKESEIECKGNITSKYCDISKLEDIERVFKWIEDNFGSVYVLVNCAGILYQGQITGVGD 360
+AKE E + + ++ D+S L+ I V + + F + VL+N AG L G +
Sbjct: 47 IAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAG-LALGTDKVI-- 103
Query: 361 NPLSVNQLVETLDVNLKGSILCARTAVECMKKYDISGHIININSLAGHYVPFSSSMNLYA 540
L+++ V + N+ G + R + + G I+N+ S+AG S +Y
Sbjct: 104 -DLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKN-KGDILNVGSIAGRESYVGGS--VYC 159
Query: 541 STKYAITAFTETLSQELAHFSNRIKVTSLSPGLTKTEMA 657
STK A+ FT L +E RI++ + PGL +TE +
Sbjct: 160 STKSALAQFTSALRKET--IDTRIRIMEVDPGLVETEFS 196
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 41.5 bits (93), Expect = 1e-04
Identities = 33/128 (25%), Positives = 54/128 (42%)
Frame = +1
Query: 235 DISKLEDIERVFKWIEDNFGSVYVLVNCAGILYQGQITGVGDNPLSVNQLVETLDVNLKG 414
D+SK + IE + + G + VL+N AG+ LS + + L+G
Sbjct: 53 DVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPF-----EQLSHESWDHDVSLVLRG 107
Query: 415 SILCARTAVECMKKYDISGHIININSLAGHYVPFSSSMNLYASTKYAITAFTETLSQELA 594
+ L R + M K G I+NI S+ GH S + Y++ K + T+ L+
Sbjct: 108 NYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYLGSPA---YSAAKAGLENLTKALAVRYG 164
Query: 595 HFSNRIKV 618
R+ V
Sbjct: 165 PLGIRVNV 172
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 39.9 bits (89), Expect = 3e-04
Identities = 33/154 (21%), Positives = 71/154 (46%)
Frame = +1
Query: 193 SEIECKGNITSKYCDISKLEDIERVFKWIEDNFGSVYVLVNCAGILYQGQITGVGDNPLS 372
S ++ ++ C+I+K +D+E ++ + + L+N A I + + + S
Sbjct: 72 SFLQYNSKFSALKCNITKDKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSI-----S 126
Query: 373 VNQLVETLDVNLKGSILCARTAVECMKKYDISGHIININSLAGHYVPFSSSMNLYASTKY 552
+L + + N+ G L +A+ + D + H++NI S ++ + + Y+S+K
Sbjct: 127 RQELQKCFETNVIGQ-LAITSALFPLLLQDPNPHVVNIASSLAYFS--AMGVGAYSSSKA 183
Query: 553 AITAFTETLSQELAHFSNRIKVTSLSPGLTKTEM 654
A+ + ETL +E+ K + G K+ M
Sbjct: 184 ALVSLHETLEEEVLSQHPNFKFSLYVLGQIKSTM 217
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 37.9 bits (84), Expect = 0.001
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Frame = +1
Query: 247 LEDIERVFKWIEDNFGSVYV--LVNCAGILYQGQITGVGDNPLSVNQLVETLDVNLKGSI 420
+ D++ K ++ F SV + +V+ AG+L + ++ ++ T NL +I
Sbjct: 57 IADVQSDMKNLKSIFESVEIDTVVHAAGVLQSSLCVRTSEK--EIDSIICT---NLVSAI 111
Query: 421 LCARTAV-ECM--KKYDISGHIININSLAGHYVPFSSSMNLYASTKYAITAFTETLSQEL 591
++ A+ E K + I+NI+S Y +S+ YA++K + +FT+ L+ E+
Sbjct: 112 KLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTSV--YAASKAGLESFTKVLAAEV 169
Query: 592 AHFSNRIKVTSLSPGLTKTEM 654
A S I+V ++SPG T M
Sbjct: 170 A--SKGIRVNAISPGYVDTPM 188
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 37.1 bits (82), Expect = 0.002
Identities = 38/123 (30%), Positives = 57/123 (46%)
Frame = +1
Query: 292 GSVYVLVNCAGILYQGQITGVGDNPLSVNQLVETLDVNLKGSILCARTAVECMKKYDISG 471
G + VLVN I YQ + D + Q T N+ + A+ MK
Sbjct: 120 GWIDVLVN--NIAYQQVAQSIED--IDDEQWDLTFKTNIFSFFWVTKAAISHMKS---GS 172
Query: 472 HIININSLAGHYVPFSSSMNLYASTKYAITAFTETLSQELAHFSNRIKVTSLSPGLTKTE 651
I+N +S+ YV ++ Y STK AITAFT LS + A + I+V +++PG T
Sbjct: 173 SIVNCSSINA-YVGRPDLLD-YTSTKGAITAFTRGLSNQYA--QHGIRVNAVAPGPIYTP 228
Query: 652 MAA 660
+ +
Sbjct: 229 LVS 231
>SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1107
Score = 29.1 bits (62), Expect = 0.62
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -3
Query: 245 LEMSQYLDVMFPLHSISDSLAINSSMFLIELQ 150
L +SQ L+ FPL+S+ DSL + +++ I ++
Sbjct: 137 LWLSQALNTPFPLNSLDDSLDVKKTIYTIAIK 168
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/85 (22%), Positives = 36/85 (42%)
Frame = +1
Query: 217 ITSKYCDISKLEDIERVFKWIEDNFGSVYVLVNCAGILYQGQITGVGDNPLSVNQLVETL 396
I +YC+ L I + F I +N ++Y G+LY GV + ++ T
Sbjct: 83 IILEYCENGSLRSICKNFGKIPENLVALYTFQVLQGLLYLHN-QGVIHRDIKGANILTTK 141
Query: 397 DVNLKGSILCARTAVECMKKYDISG 471
D +K + T + ++ + + G
Sbjct: 142 DGTIKLADFGVATKINALEDHSVVG 166
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 475 IININSLAGHYVPFSSSMNLYASTKYAITA 564
+ N G FSSS + YA+T YA TA
Sbjct: 1173 VANGGGKGGFNFDFSSSTDTYAATSYAYTA 1202
>SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD
subfamily|Schizosaccharomyces pombe|chr 1|||Manual
Length = 887
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 136 WSKLN*SSIKNIELLMAKESEIECKGNITSKYCDISKLED 255
W LN +KN +L+++ ++ ++ S C ISKLE+
Sbjct: 458 WQTLN--EVKNENILLSQRNDKSFLKSLKSFLCSISKLEN 495
>SPAC4A8.04 |isp6|prb1|vacuolar serine protease
Isp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 538 ASTKYAITAFTETLSQELAHFSNRIK-VTSLSPGL 639
A++K AIT T++ ++A+FSN V +PGL
Sbjct: 355 AASKKAITVGASTINDQMAYFSNYGSCVDIFAPGL 389
>SPBC776.06c |||spindle pole body interacting protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 653 ISVFVNPGDKLVTLILLEK*ANSCERVSVKAVIAYFVLA 537
IS +NP + L+T +L+ K + S +V+A FVL+
Sbjct: 266 ISADINPINVLITALLISKKVLFLTKTSSASVLADFVLS 304
>SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 424 CARTAVECMKKYDISGHII 480
CART+ E +KK+ H+I
Sbjct: 34 CARTSPELLKKFGCDAHVI 52
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 290 KLSSIHLKTLSISSSLEMSQYLDVMFPLHSISDSLAINSS 171
+LSS L T + SSS LD S+S S+ + SS
Sbjct: 3630 ELSSYDLSTSAFSSSSSEPSTLDYSVSSSSLSSSIGVGSS 3669
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 25.4 bits (53), Expect = 7.7
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 394 LDVNLKGSILCARTAVECMKKY---DISGHIININSLAGHYVPFSSSMNLYASTKYAITA 564
+DV S L R V ++Y I H IN+ L G Y+P ++ S +Y
Sbjct: 1994 IDVPFHSSFL--RGGVRMFREYLVKKIFPHQINVAKLRGKYIPNLTAKPFEISKEYFQNV 2051
Query: 565 FTETLSQEL 591
+ T SQ +
Sbjct: 2052 YDLTGSQRI 2060
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 25.4 bits (53), Expect = 7.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 68 VNYYSFFFVFLYVCLFRS 15
++Y+S F FL+VC F S
Sbjct: 520 LDYFSIFITFLHVCSFGS 537
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,764,208
Number of Sequences: 5004
Number of extensions: 57042
Number of successful extensions: 178
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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